Variant report

Variant rs2369386
Chromosome Location chr12:693522-693523
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:685800-694400 Weak transcription Spleen Spleen
2 chr12:685800-700400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr12:686000-694400 Weak transcription GM12878-XiMat blood
4 chr12:686000-695400 Weak transcription Esophagus oesophagus
5 chr12:686200-694800 Weak transcription Stomach Mucosa stomach
6 chr12:686200-716200 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr12:686600-700400 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr12:688800-696800 Weak transcription Brain Substantia Nigra brain
9 chr12:688800-700400 Weak transcription Brain Anterior Caudate brain
10 chr12:689000-699600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr12:689200-700400 Weak transcription Brain Hippocampus Middle brain
12 chr12:690000-694400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr12:690000-696800 Enhancers Liver Liver
14 chr12:690400-693800 Weak transcription H9 Cell Line embryonic stem cell
15 chr12:690400-694600 Weak transcription K562 blood
16 chr12:690400-697800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr12:691000-693800 Weak transcription Psoas Muscle Psoas
18 chr12:692000-693600 Enhancers Fetal Muscle Leg muscle
19 chr12:692800-694400 Weak transcription A549 lung
20 chr12:692800-694600 Weak transcription Duodenum Mucosa Duodenum
21 chr12:692800-694800 Weak transcription Right Ventricle heart
22 chr12:692800-699400 Weak transcription Pancreas Pancrea
23 chr12:693000-693600 Enhancers Skeletal Muscle Female skeletal muscle
24 chr12:693000-694400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr12:693000-695000 Enhancers HepG2 liver
26 chr12:693000-696400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr12:693200-693600 Flanking Active TSS Fetal Heart heart
28 chr12:693200-693600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
29 chr12:693400-693600 Enhancers Left Ventricle heart

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