Variant report

Variant	rs2370409
Chromosome Location	chr3:133009814-133009815
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1513363	0.85[LWK][hapmap]
rs1708356	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1708389	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17298063	0.85[LWK][hapmap]
rs1849506	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap]
rs4622900	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4854579	0.85[LWK][hapmap]
rs4854707	0.82[LWK][hapmap]
rs6776275	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs769097	0.85[LWK][hapmap]
rs9843370	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:132996200-133012200	Weak transcription	HSMM	muscle
2	chr3:132997000-133010800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr3:132997200-133012400	Weak transcription	HSMMtube	muscle
4	chr3:133003400-133010400	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr3:133003400-133014000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr3:133003400-133015400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:133003600-133011000	Weak transcription	Fetal Brain Male	brain
8	chr3:133003600-133012400	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr3:133003600-133014000	Weak transcription	Right Atrium	heart
10	chr3:133005600-133010600	Weak transcription	Fetal Lung	lung
11	chr3:133009400-133013000	Enhancers	Fetal Brain Female	brain
12	chr3:133009800-133015400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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