The 2.0 version of rSNPBase

Variant report

Variant rs2372373
Chromosome Location chr3:43366691-43366692
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43332800-43377000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:43345000-43368200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr3:43345400-43367400 Weak transcription Rectal Smooth Muscle rectum
4 chr3:43346000-43377000 Weak transcription K562 blood
5 chr3:43346400-43367200 Weak transcription Fetal Lung lung
6 chr3:43348400-43378800 Weak transcription Hela-S3 cervix
7 chr3:43350000-43367400 Weak transcription Aorta Aorta
8 chr3:43351000-43375600 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr3:43353000-43374000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr3:43353200-43367400 Weak transcription Dnd41 blood
11 chr3:43353400-43375200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr3:43354400-43369600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr3:43359200-43367000 Weak transcription Colon Smooth Muscle Colon
14 chr3:43359400-43366800 Weak transcription Small Intestine intestine
15 chr3:43359400-43367800 Weak transcription Stomach Mucosa stomach
16 chr3:43359400-43374000 Weak transcription Placenta Placenta
17 chr3:43359400-43376600 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr3:43359600-43367000 Weak transcription Fetal Intestine Large intestine
19 chr3:43359600-43367200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr3:43359600-43367200 Weak transcription Duodenum Mucosa Duodenum
21 chr3:43359600-43367200 Weak transcription Fetal Heart heart
22 chr3:43359600-43367400 Weak transcription Fetal Stomach stomach
23 chr3:43359600-43367400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr3:43359600-43367800 Weak transcription Brain Anterior Caudate brain
25 chr3:43359600-43371800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr3:43359600-43372000 Weak transcription NHLF lung
27 chr3:43359600-43372200 Weak transcription HSMM muscle
28 chr3:43359600-43375400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr3:43359600-43376200 Weak transcription H1 Cell Line embryonic stem cell
30 chr3:43359800-43367200 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr3:43359800-43367600 Weak transcription HSMMtube muscle
32 chr3:43359800-43368000 Weak transcription Fetal Kidney kidney
33 chr3:43359800-43368400 Weak transcription Muscle Satellite Cultured Cells --
34 chr3:43359800-43369800 Weak transcription NHEK skin
35 chr3:43360200-43368600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr3:43360400-43375600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr3:43360400-43376200 Weak transcription Brain Germinal Matrix brain
38 chr3:43360600-43367200 Weak transcription Psoas Muscle Psoas
39 chr3:43361000-43367600 Weak transcription Brain Cingulate Gyrus brain
40 chr3:43361200-43366800 Weak transcription Pancreas Pancrea
41 chr3:43361200-43367200 Weak transcription Spleen Spleen
42 chr3:43361200-43367600 Weak transcription Stomach Smooth Muscle stomach
43 chr3:43361200-43367800 Weak transcription Lung lung
44 chr3:43361200-43374600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr3:43361200-43377800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:43361400-43367600 Weak transcription Brain Inferior Temporal Lobe brain
47 chr3:43361400-43368200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr3:43362000-43367400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr3:43362400-43368600 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr3:43363400-43367200 Weak transcription Liver Liver

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Last update: Aug 31, 2015