The 2.0 version of rSNPBase

Variant report

Variant rs2389793
Chromosome Location chr1:85461407-85461408
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85454800-85461600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr1:85454800-85462000 Weak transcription Spleen Spleen
3 chr1:85454800-85462200 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:85457200-85461800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:85459600-85461600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr1:85459800-85462000 Active TSS Primary T helper cells PMA-I stimulated --
7 chr1:85460000-85461600 Enhancers Primary B cells from peripheral blood blood
8 chr1:85460400-85461800 Enhancers Primary monocytes fromperipheralblood blood
9 chr1:85460400-85463800 Active TSS GM12878-XiMat blood
10 chr1:85460600-85462200 Active TSS Primary T killer memory cells from peripheral blood blood
11 chr1:85460800-85462200 Active TSS Primary T helper 17 cells PMA-I stimulated --
12 chr1:85461000-85461600 Active TSS Primary T cells fromperipheralblood blood
13 chr1:85461000-85461600 Active TSS Monocytes-CD14+_RO01746 blood
14 chr1:85461200-85461600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
15 chr1:85461200-85463400 Flanking Active TSS Primary B cells from cord blood blood
16 chr1:85461400-85461600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:85461400-85462200 Active TSS Primary T helper cells fromperipheralblood blood
18 chr1:85461400-85462200 Active TSS Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015