Variant report

Variant rs2393085
Chromosome Location chr12:117229539-117229540
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:117198000-117256200 Weak transcription Hela-S3 cervix
2 chr12:117198200-117233600 Weak transcription Fetal Stomach stomach
3 chr12:117198200-117236600 Weak transcription A549 lung
4 chr12:117198600-117233600 Weak transcription Right Atrium heart
5 chr12:117209800-117232600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr12:117216800-117229600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr12:117221200-117236800 Weak transcription Brain Hippocampus Middle brain
8 chr12:117222000-117230200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr12:117222000-117248000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr12:117222200-117231000 Weak transcription Fetal Brain Male brain
11 chr12:117222200-117235400 Weak transcription Thymus Thymus
12 chr12:117222400-117236600 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr12:117222400-117236800 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr12:117222600-117236600 Weak transcription Brain Angular Gyrus brain
15 chr12:117222600-117236600 Weak transcription Brain Anterior Caudate brain
16 chr12:117222800-117236600 Weak transcription Brain Inferior Temporal Lobe brain
17 chr12:117222800-117236600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr12:117223400-117234400 Weak transcription H9 Cell Line embryonic stem cell
19 chr12:117223600-117231800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr12:117223600-117246200 Weak transcription H1 Cell Line embryonic stem cell
21 chr12:117223800-117230000 Weak transcription GM12878-XiMat blood
22 chr12:117225000-117236600 Weak transcription Primary B cells from cord blood blood
23 chr12:117225000-117237600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr12:117225200-117236600 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr12:117225200-117236800 Weak transcription Brain Cingulate Gyrus brain
26 chr12:117225200-117256200 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr12:117225400-117234000 Weak transcription Brain Germinal Matrix brain
28 chr12:117225600-117233000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr12:117225600-117235400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:117227000-117249200 Weak transcription Primary T cells from cord blood blood
31 chr12:117227400-117235400 Weak transcription Dnd41 blood
32 chr12:117227600-117234800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:117228000-117235600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr12:117228400-117256400 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr12:117229000-117234000 Weak transcription Fetal Brain Female brain
36 chr12:117229000-117235600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr12:117229200-117231200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr12:117229200-117256200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr12:117229400-117229800 Strong transcription Fetal Thymus thymus
40 chr12:117229400-117230800 Weak transcription Cortex derived primary cultured neurospheres brain

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