Variant report

Variant rs2403054
Chromosome Location chr12:83400044-83400045
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:83358400-83409200 Weak transcription Brain Angular Gyrus brain
2 chr12:83358600-83409400 Weak transcription Brain Inferior Temporal Lobe brain
3 chr12:83375600-83405600 Weak transcription Rectal Smooth Muscle rectum
4 chr12:83377600-83409400 Weak transcription Brain Hippocampus Middle brain
5 chr12:83377800-83410200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr12:83378400-83409600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr12:83378800-83409000 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr12:83380000-83403200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr12:83380000-83409200 Weak transcription Gastric stomach
10 chr12:83386000-83404200 Weak transcription Colon Smooth Muscle Colon
11 chr12:83386200-83403600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr12:83388400-83400800 Weak transcription Fetal Kidney kidney
13 chr12:83390200-83409200 Weak transcription Pancreas Pancrea
14 chr12:83392200-83409000 Weak transcription Stomach Mucosa stomach
15 chr12:83397000-83403800 Weak transcription Placenta Amnion Placenta Amnion
16 chr12:83398000-83409000 Weak transcription Brain Substantia Nigra brain
17 chr12:83398000-83409000 Weak transcription Fetal Heart heart
18 chr12:83398400-83401600 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr12:83398400-83402600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr12:83398400-83409600 Weak transcription Brain Anterior Caudate brain
21 chr12:83398800-83405800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr12:83399000-83400200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
23 chr12:83399000-83401600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr12:83399200-83400200 Strong transcription Fetal Intestine Large intestine
25 chr12:83399200-83402600 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr12:83399400-83400200 Strong transcription Brain Cingulate Gyrus brain
27 chr12:83399600-83400200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
28 chr12:83399600-83400400 ZNF genes & repeats Fetal Muscle Leg muscle
29 chr12:83399600-83401400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr12:83399800-83400200 ZNF genes & repeats Fetal Lung lung
31 chr12:83399800-83400200 Strong transcription Fetal Stomach stomach
32 chr12:83399800-83400800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr12:83399800-83409400 Weak transcription Fetal Brain Male brain
34 chr12:83400000-83400200 Strong transcription Stomach Smooth Muscle stomach
35 chr12:83400000-83400800 Weak transcription Fetal Muscle Trunk muscle
36 chr12:83400000-83402600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr12:83400000-83403000 Strong transcription Primary monocytes fromperipheralblood blood
38 chr12:83400000-83403600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr12:83400000-83403600 Weak transcription Esophagus oesophagus

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