The 2.0 version of rSNPBase

Variant report

Variant rs2410052
Chromosome Location chr21:40126896-40126897
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:40115400-40129600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr21:40120200-40127600 Weak transcription Spleen Spleen
3 chr21:40120600-40127400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr21:40120600-40127600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr21:40122600-40128600 Enhancers Primary hematopoietic stem cells blood
6 chr21:40124000-40134000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr21:40124200-40128400 Enhancers Primary neutrophils fromperipheralblood blood
8 chr21:40124200-40128800 Weak transcription Fetal Kidney kidney
9 chr21:40124200-40131200 Enhancers Primary monocytes fromperipheralblood blood
10 chr21:40124200-40133400 Weak transcription Fetal Intestine Large intestine
11 chr21:40124200-40134200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr21:40124400-40127200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr21:40124400-40127400 Weak transcription Adipose Nuclei Adipose
14 chr21:40125000-40128200 Enhancers NHEK skin
15 chr21:40125000-40130000 Weak transcription Aorta Aorta
16 chr21:40125200-40127000 Weak transcription Lung lung
17 chr21:40125200-40127400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr21:40125200-40127400 Weak transcription Stomach Smooth Muscle stomach
19 chr21:40125200-40127600 Weak transcription Placenta Placenta
20 chr21:40125200-40127600 Weak transcription Left Ventricle heart
21 chr21:40125200-40127600 Weak transcription Psoas Muscle Psoas
22 chr21:40125200-40132000 Weak transcription Fetal Thymus thymus
23 chr21:40125400-40127200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr21:40125400-40127400 Weak transcription HMEC breast
25 chr21:40125400-40128400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr21:40125400-40128600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr21:40125400-40131200 Weak transcription Ovary ovary
28 chr21:40125400-40132800 Weak transcription Fetal Muscle Leg muscle
29 chr21:40125400-40138800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr21:40125800-40127600 Weak transcription Rectal Smooth Muscle rectum
31 chr21:40125800-40132400 Weak transcription Fetal Intestine Small intestine
32 chr21:40126000-40127200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr21:40126000-40127400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr21:40126200-40127200 Weak transcription Muscle Satellite Cultured Cells --
35 chr21:40126200-40127400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr21:40126200-40129000 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr21:40126400-40127400 Weak transcription Fetal Stomach stomach
38 chr21:40126400-40139000 Weak transcription Esophagus oesophagus
39 chr21:40126400-40139000 Weak transcription Right Atrium heart
40 chr21:40126600-40127000 Weak transcription Fetal Lung lung
41 chr21:40126600-40127200 Enhancers Monocytes-CD14+_RO01746 blood
42 chr21:40126600-40130600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr21:40126800-40127400 Weak transcription Duodenum Mucosa Duodenum
44 chr21:40126800-40127600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015