Variant report

Variant rs241317
Chromosome Location chr1:228918485-228918486
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228912600-228920800 Weak transcription Fetal Thymus thymus
2 chr1:228915400-228921200 Weak transcription Monocytes-CD14+_RO01746 blood
3 chr1:228915600-228919200 Weak transcription Primary monocytes fromperipheralblood blood
4 chr1:228916400-228919600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr1:228916600-228920600 Enhancers Placenta Amnion Placenta Amnion
6 chr1:228916800-228919200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:228916800-228921000 Enhancers Fetal Intestine Small intestine
8 chr1:228917000-228918800 Enhancers NHDF-Ad bronchial
9 chr1:228917000-228919200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:228917000-228919200 Enhancers Psoas Muscle Psoas
11 chr1:228917000-228921000 Enhancers Fetal Intestine Large intestine
12 chr1:228917200-228920200 Enhancers Stomach Mucosa stomach
13 chr1:228917400-228918600 Enhancers A549 lung
14 chr1:228917400-228918800 Enhancers Right Atrium heart
15 chr1:228917400-228921400 Weak transcription Brain Hippocampus Middle brain
16 chr1:228917600-228918600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:228917600-228918600 Enhancers Pancreatic Islets Pancreatic Islet
18 chr1:228917600-228918600 Enhancers Left Ventricle heart
19 chr1:228917600-228918800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:228917600-228918800 Enhancers Lung lung
21 chr1:228917600-228919600 Enhancers Gastric stomach
22 chr1:228917600-228920000 Enhancers Pancreas Pancrea
23 chr1:228917600-228921400 Weak transcription Brain Angular Gyrus brain
24 chr1:228917600-228921400 Weak transcription Brain Substantia Nigra brain
25 chr1:228917800-228918600 Enhancers Rectal Mucosa Donor 31 rectum
26 chr1:228917800-228918800 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr1:228917800-228918800 Weak transcription Placenta Placenta
28 chr1:228918000-228918600 Weak transcription Ovary ovary
29 chr1:228918000-228918600 Enhancers Spleen Spleen
30 chr1:228918000-228921400 Weak transcription Brain Anterior Caudate brain
31 chr1:228918000-228921400 Weak transcription Brain Cingulate Gyrus brain
32 chr1:228918200-228919000 Weak transcription Fetal Brain Male brain
33 chr1:228918200-228919000 Bivalent Enhancer Stomach Smooth Muscle stomach
34 chr1:228918200-228919200 Enhancers Skeletal Muscle Male skeletal muscle
35 chr1:228918200-228920600 Enhancers Sigmoid Colon Sigmoid Colon
36 chr1:228918400-228918600 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
37 chr1:228918400-228918600 Enhancers Fetal Kidney kidney
38 chr1:228918400-228918600 Flanking Active TSS Fetal Lung lung
39 chr1:228918400-228918600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
40 chr1:228918400-228918800 Flanking Active TSS Duodenum Mucosa Duodenum
41 chr1:228918400-228919000 Enhancers Skeletal Muscle Female skeletal muscle
42 chr1:228918400-228919600 Flanking Active TSS HepG2 liver
43 chr1:228918400-228919800 Enhancers Liver Liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links