The 2.0 version of rSNPBase

Variant report

Variant rs2430402
Chromosome Location chr1:223299654-223299655
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223276800-223302200 Weak transcription Esophagus oesophagus
2 chr1:223277000-223306800 Weak transcription Primary T cells from cord blood blood
3 chr1:223282400-223302800 Weak transcription Thymus Thymus
4 chr1:223283400-223302600 Weak transcription Gastric stomach
5 chr1:223289400-223302400 Weak transcription Spleen Spleen
6 chr1:223290800-223302400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:223293200-223302400 Weak transcription Placenta Placenta
8 chr1:223294200-223302200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:223297000-223302800 Weak transcription NH-A brain
10 chr1:223297200-223300200 Weak transcription Brain Anterior Caudate brain
11 chr1:223297200-223300800 Weak transcription Ovary ovary
12 chr1:223297200-223301600 Weak transcription Fetal Muscle Leg muscle
13 chr1:223297200-223301600 Weak transcription Stomach Smooth Muscle stomach
14 chr1:223297200-223302400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:223297200-223302400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:223297200-223302400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:223297200-223302400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr1:223297200-223302400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:223297200-223302400 Weak transcription Adipose Nuclei Adipose
20 chr1:223297200-223302400 Weak transcription Colon Smooth Muscle Colon
21 chr1:223297200-223302400 Weak transcription Lung lung
22 chr1:223297200-223302400 Weak transcription Rectal Smooth Muscle rectum
23 chr1:223297200-223302400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:223297200-223302600 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:223297200-223302600 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr1:223297200-223302600 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:223297200-223302600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:223297200-223302600 Weak transcription Liver Liver
29 chr1:223297200-223302600 Weak transcription Colonic Mucosa Colon
30 chr1:223297200-223302600 Weak transcription Duodenum Mucosa Duodenum
31 chr1:223297200-223302600 Weak transcription Fetal Intestine Small intestine
32 chr1:223297200-223302600 Weak transcription Right Atrium heart
33 chr1:223297200-223302600 Weak transcription Stomach Mucosa stomach
34 chr1:223297200-223302800 Weak transcription Psoas Muscle Psoas
35 chr1:223297200-223302800 Weak transcription HSMM muscle
36 chr1:223297200-223307000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:223297200-223307000 Weak transcription Aorta Aorta
38 chr1:223297400-223302600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:223297600-223306800 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr1:223298800-223300400 Enhancers Primary monocytes fromperipheralblood blood
41 chr1:223299400-223300000 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr1:223299400-223300200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:223299400-223302400 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:223299600-223299800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:223299600-223299800 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015