Variant report

Variant rs2440167
Chromosome Location chr17:19482887-19482888
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19457000-19483000 Weak transcription Psoas Muscle Psoas
2 chr17:19464000-19483800 Weak transcription A549 lung
3 chr17:19481000-19483400 Enhancers Liver Liver
4 chr17:19481200-19485600 Weak transcription HepG2 liver
5 chr17:19482200-19483400 Bivalent Enhancer Fetal Stomach stomach
6 chr17:19482600-19483000 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
7 chr17:19482600-19483000 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
8 chr17:19482600-19483000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
9 chr17:19482600-19483000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
10 chr17:19482600-19483000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
11 chr17:19482600-19483000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
12 chr17:19482600-19483000 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr17:19482600-19483000 Bivalent Enhancer Fetal Muscle Trunk muscle
14 chr17:19482600-19483200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr17:19482600-19483200 Bivalent Enhancer Primary monocytes fromperipheralblood blood
16 chr17:19482600-19483200 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
17 chr17:19482600-19483200 Bivalent Enhancer Fetal Brain Male brain
18 chr17:19482600-19483400 Bivalent/Poised TSS Colonic Mucosa Colon
19 chr17:19482600-19483400 Enhancers Lung lung
20 chr17:19482600-19483800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
21 chr17:19482600-19483800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
22 chr17:19482600-19484000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
23 chr17:19482600-19484000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
24 chr17:19482600-19484000 Bivalent Enhancer Placenta Placenta
25 chr17:19482800-19483000 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr17:19482800-19483000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
27 chr17:19482800-19483000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
28 chr17:19482800-19483000 Active TSS Fetal Brain Female brain
29 chr17:19482800-19483000 Enhancers Ovary ovary
30 chr17:19482800-19483000 Bivalent Enhancer Placenta Amnion Placenta Amnion
31 chr17:19482800-19483000 Bivalent Enhancer Rectal Mucosa Donor 31 rectum
32 chr17:19482800-19483000 Bivalent Enhancer Stomach Mucosa stomach
33 chr17:19482800-19483000 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
34 chr17:19482800-19483200 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr17:19482800-19483200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr17:19482800-19483200 Enhancers Brain Hippocampus Middle brain
37 chr17:19482800-19483200 Bivalent Enhancer Fetal Lung lung
38 chr17:19482800-19483200 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
39 chr17:19482800-19483400 Bivalent Enhancer Primary hematopoietic stem cells blood
40 chr17:19482800-19483400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr17:19482800-19483400 Enhancers Adipose Nuclei Adipose
42 chr17:19482800-19483400 Weak transcription Colon Smooth Muscle Colon
43 chr17:19482800-19483400 Bivalent Enhancer Duodenum Mucosa Duodenum
44 chr17:19482800-19483400 Active TSS Gastric stomach
45 chr17:19482800-19483400 Enhancers Spleen Spleen
46 chr17:19482800-19483600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr17:19482800-19483600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
48 chr17:19482800-19483600 Active TSS Brain Anterior Caudate brain
49 chr17:19482800-19483600 Bivalent/Poised TSS Fetal Muscle Leg muscle
50 chr17:19482800-19483600 Active TSS Rectal Smooth Muscle rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links