Variant report

Variant rs2453489
Chromosome Location chr12:49259194-49259195
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49255800-49260200 Active TSS Brain Angular Gyrus brain
2 chr12:49256000-49260200 Active TSS Brain Inferior Temporal Lobe brain
3 chr12:49256200-49259400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
4 chr12:49256200-49259800 Active TSS Brain Cingulate Gyrus brain
5 chr12:49256400-49260200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
6 chr12:49256600-49260000 Active TSS Brain Anterior Caudate brain
7 chr12:49257200-49259400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
8 chr12:49257800-49259200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr12:49257800-49259200 Bivalent Enhancer Primary monocytes fromperipheralblood blood
10 chr12:49257800-49259400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr12:49257800-49260000 Active TSS HUES64 Cell Line embryonic stem cell
12 chr12:49258000-49259400 Flanking Active TSS Brain Germinal Matrix brain
13 chr12:49258000-49259800 Flanking Active TSS Primary B cells from cord blood blood
14 chr12:49258000-49260200 Active TSS Brain Substantia Nigra brain
15 chr12:49258200-49260000 Active TSS iPS-15b Cell Line embryonic stem cell
16 chr12:49258400-49259200 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
17 chr12:49258400-49259400 Flanking Active TSS Duodenum Mucosa Duodenum
18 chr12:49258400-49259800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr12:49258400-49260200 Active TSS Fetal Kidney kidney
20 chr12:49258600-49259200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
21 chr12:49258600-49259200 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
22 chr12:49258600-49259200 Flanking Active TSS Fetal Brain Female brain
23 chr12:49258600-49259200 Bivalent Enhancer Fetal Lung lung
24 chr12:49258600-49259200 Flanking Active TSS Pancreas Pancrea
25 chr12:49258600-49259200 Flanking Active TSS HepG2 liver
26 chr12:49258600-49259400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
27 chr12:49258600-49259400 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
28 chr12:49258600-49259400 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
29 chr12:49258600-49259400 Flanking Bivalent TSS/Enh Dnd41 blood
30 chr12:49258600-49259800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr12:49258600-49260000 Enhancers Spleen Spleen
32 chr12:49258800-49259200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr12:49258800-49259200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
34 chr12:49258800-49259200 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
35 chr12:49258800-49259200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
36 chr12:49258800-49259200 Bivalent Enhancer Placenta Placenta
37 chr12:49258800-49259200 Flanking Bivalent TSS/Enh Stomach Mucosa stomach
38 chr12:49258800-49259200 Flanking Bivalent TSS/Enh NHEK skin
39 chr12:49258800-49259400 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr12:49258800-49259400 Flanking Active TSS Primary B cells from peripheral blood blood
41 chr12:49258800-49259400 Flanking Active TSS Primary T cells from cord blood blood
42 chr12:49258800-49259400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
43 chr12:49258800-49259400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
44 chr12:49258800-49259400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
45 chr12:49258800-49259400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr12:49258800-49259400 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
47 chr12:49258800-49259600 Active TSS ES-WA7 Cell Line embryonic stem cell
48 chr12:49258800-49259600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
49 chr12:49258800-49259600 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
50 chr12:49258800-49259800 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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