Variant report

Variant rs2453581
Chromosome Location chr17:19438560-19438561
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19437600-19438800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
2 chr17:19437800-19438600 Bivalent Enhancer Spleen Spleen
3 chr17:19437800-19441400 Weak transcription Pancreas Pancrea
4 chr17:19437800-19441800 Weak transcription Gastric stomach
5 chr17:19438000-19442000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr17:19438200-19438600 Bivalent Enhancer Duodenum Mucosa Duodenum
7 chr17:19438200-19441600 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr17:19438200-19446800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr17:19438400-19438600 Enhancers Primary T helper cells fromperipheralblood blood
10 chr17:19438400-19438600 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
11 chr17:19438400-19438600 Enhancers Psoas Muscle Psoas
12 chr17:19438400-19438600 Flanking Active TSS HepG2 liver
13 chr17:19438400-19438800 Active TSS Liver Liver
14 chr17:19438400-19440400 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr17:19438400-19441000 Weak transcription Left Ventricle heart
16 chr17:19438400-19441600 Weak transcription Brain Inferior Temporal Lobe brain
17 chr17:19438400-19441600 Weak transcription GM12878-XiMat blood
18 chr17:19438400-19442000 Weak transcription Brain Substantia Nigra brain
19 chr17:19438400-19443200 Weak transcription Lung lung
20 chr17:19438400-19445600 Weak transcription A549 lung
21 chr17:19438400-19454400 Weak transcription Aorta Aorta
22 chr17:19438400-19456200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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