The 2.0 version of rSNPBase

Variant report

Variant rs2456061
Chromosome Location chr15:76598643-76598644
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:76558000-76603000 Weak transcription Aorta Aorta
2 chr15:76574800-76601400 Weak transcription Pancreas Pancrea
3 chr15:76574800-76602000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr15:76576200-76602800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr15:76579200-76602000 Weak transcription Thymus Thymus
6 chr15:76579600-76602000 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr15:76580600-76600400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr15:76583600-76602000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr15:76583800-76602000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr15:76584000-76601400 Weak transcription Placenta Placenta
11 chr15:76584600-76602400 Weak transcription Primary B cells from cord blood blood
12 chr15:76584800-76602000 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr15:76584800-76602200 Weak transcription Fetal Thymus thymus
14 chr15:76585000-76602000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr15:76585200-76602400 Weak transcription Primary T cells from cord blood blood
16 chr15:76586200-76602000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr15:76586200-76602400 Weak transcription NH-A brain
18 chr15:76586400-76601800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr15:76586400-76602000 Weak transcription Stomach Mucosa stomach
20 chr15:76586400-76602400 Weak transcription Brain Hippocampus Middle brain
21 chr15:76588000-76602000 Weak transcription Psoas Muscle Psoas
22 chr15:76589600-76602000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr15:76590800-76600600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr15:76591000-76602000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr15:76591000-76602000 Weak transcription Ovary ovary
26 chr15:76591600-76601800 Weak transcription NHEK skin
27 chr15:76591800-76600600 Weak transcription HMEC breast
28 chr15:76592000-76599800 Weak transcription Left Ventricle heart
29 chr15:76592000-76600400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr15:76592000-76600800 Weak transcription Gastric stomach
31 chr15:76592000-76602000 Weak transcription Fetal Intestine Large intestine
32 chr15:76592000-76602200 Weak transcription Primary T cells fromperipheralblood blood
33 chr15:76592000-76602200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr15:76592200-76599200 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr15:76592200-76601400 Weak transcription Right Atrium heart
36 chr15:76592200-76602200 Weak transcription Spleen Spleen
37 chr15:76592400-76602000 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr15:76592600-76602400 Weak transcription Primary hematopoietic stem cells blood
39 chr15:76593000-76600800 Weak transcription Duodenum Mucosa Duodenum
40 chr15:76593000-76601800 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr15:76593200-76602000 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr15:76593200-76602000 Weak transcription Small Intestine intestine
43 chr15:76593400-76599800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr15:76593400-76600600 Weak transcription K562 blood
45 chr15:76593400-76602000 Weak transcription Primary B cells from peripheral blood blood
46 chr15:76593400-76602000 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr15:76593400-76602400 Weak transcription Lung lung
48 chr15:76593400-76602600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr15:76593600-76600800 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr15:76593600-76602000 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015