Variant report

Variant rs2460648
Chromosome Location chr15:56533771-56533772
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56508000-56534400 Weak transcription Fetal Heart heart
2 chr15:56514000-56535000 Weak transcription Pancreas Pancrea
3 chr15:56514800-56534800 Weak transcription Placenta Amnion Placenta Amnion
4 chr15:56524600-56533800 Weak transcription Aorta Aorta
5 chr15:56524600-56534800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:56524800-56533800 Weak transcription Ovary ovary
7 chr15:56524800-56534800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr15:56524800-56534800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr15:56524800-56534800 Weak transcription Rectal Smooth Muscle rectum
10 chr15:56524800-56534800 Weak transcription Small Intestine intestine
11 chr15:56524800-56535000 Weak transcription Esophagus oesophagus
12 chr15:56525400-56534800 Weak transcription Placenta Placenta
13 chr15:56525400-56535000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr15:56525600-56535000 Weak transcription Lung lung
15 chr15:56525800-56533800 Weak transcription Fetal Muscle Leg muscle
16 chr15:56526200-56534200 Weak transcription Fetal Intestine Large intestine
17 chr15:56526800-56533800 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr15:56527800-56533800 Weak transcription Psoas Muscle Psoas
19 chr15:56528800-56533800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr15:56529400-56535000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr15:56530200-56533800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr15:56530200-56533800 Weak transcription Brain Anterior Caudate brain
23 chr15:56530600-56534600 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr15:56531400-56535000 Weak transcription Left Ventricle heart
25 chr15:56532000-56537000 Active TSS GM12878-XiMat blood
26 chr15:56532400-56533800 Enhancers Primary T helper cells fromperipheralblood blood
27 chr15:56532400-56537000 Active TSS iPS-20b Cell Line embryonic stem cell
28 chr15:56532600-56533800 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr15:56532600-56534400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr15:56532600-56537000 Active TSS HUES48 Cell Line embryonic stem cell
31 chr15:56532600-56537000 Active TSS HUES6 Cell Line embryonic stem cell
32 chr15:56532600-56537000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr15:56532600-56537000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
34 chr15:56532600-56537000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr15:56532600-56537000 Active TSS HMEC breast
36 chr15:56533000-56533800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
37 chr15:56533000-56537000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr15:56533200-56533800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr15:56533200-56533800 Flanking Active TSS Fetal Brain Female brain
40 chr15:56533200-56534200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
41 chr15:56533200-56534600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr15:56533200-56534800 Enhancers Primary monocytes fromperipheralblood blood
43 chr15:56533200-56535200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr15:56533200-56536800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr15:56533200-56537000 Active TSS H1 Cell Line embryonic stem cell
46 chr15:56533200-56537000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr15:56533200-56537200 Active TSS Pancreatic Islets Pancreatic Islet
48 chr15:56533400-56533800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
49 chr15:56533400-56533800 Enhancers Primary T helper 17 cells PMA-I stimulated --
50 chr15:56533400-56533800 Flanking Active TSS Cortex derived primary cultured neurospheres brain

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