The 2.0 version of rSNPBase

Variant report

Variant rs2473926
Chromosome Location chr11:34177677-34177678
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34128800-34178000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr11:34129000-34177800 Strong transcription HUES48 Cell Line embryonic stem cell
3 chr11:34129200-34177800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr11:34129600-34178200 Strong transcription Liver Liver
5 chr11:34130000-34181800 Strong transcription A549 lung
6 chr11:34138800-34185600 Strong transcription Fetal Brain Female brain
7 chr11:34146200-34187600 Strong transcription Cortex derived primary cultured neurospheres brain
8 chr11:34150600-34178000 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr11:34152200-34184800 Strong transcription Brain Germinal Matrix brain
10 chr11:34152400-34186600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr11:34155800-34177800 Strong transcription Right Ventricle heart
12 chr11:34165800-34184600 Weak transcription Stomach Mucosa stomach
13 chr11:34166800-34182400 Weak transcription Psoas Muscle Psoas
14 chr11:34169600-34196200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr11:34170200-34178600 Weak transcription Small Intestine intestine
16 chr11:34170200-34183400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr11:34170800-34182000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr11:34171400-34180000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr11:34171400-34180800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr11:34172200-34178800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr11:34172400-34185200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr11:34172600-34180000 Weak transcription Primary T cells fromperipheralblood blood
23 chr11:34172600-34190400 Strong transcription Fetal Intestine Small intestine
24 chr11:34172800-34179000 Weak transcription NH-A brain
25 chr11:34172800-34180200 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr11:34173000-34178000 Weak transcription Hela-S3 cervix
27 chr11:34173000-34182400 Strong transcription Fetal Muscle Leg muscle
28 chr11:34173000-34182400 Strong transcription Placenta Placenta
29 chr11:34173000-34183600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr11:34173200-34179200 Strong transcription Fetal Adrenal Gland Adrenal Gland
31 chr11:34173200-34180000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr11:34173200-34195600 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr11:34173400-34189400 Strong transcription HSMMtube muscle
34 chr11:34173600-34178000 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr11:34173800-34180400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr11:34173800-34185000 Strong transcription Duodenum Mucosa Duodenum
37 chr11:34174400-34184000 Weak transcription Fetal Intestine Large intestine
38 chr11:34174400-34190800 Weak transcription Colonic Mucosa Colon
39 chr11:34174600-34193400 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr11:34175200-34178800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr11:34175400-34187400 Weak transcription HMEC breast
42 chr11:34175600-34178000 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr11:34175800-34177800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr11:34175800-34177800 Enhancers Brain Substantia Nigra brain
45 chr11:34175800-34177800 Enhancers Ovary ovary
46 chr11:34175800-34179400 Weak transcription HSMM muscle
47 chr11:34176000-34177800 Genic enhancers Fetal Muscle Trunk muscle
48 chr11:34176000-34179000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr11:34176000-34179800 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr11:34176000-34181200 Weak transcription Pancreas Pancrea

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015