The 2.0 version of rSNPBase

Variant report

Variant rs2474363
Chromosome Location chr1:61929717-61929718
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61916800-61932000 Weak transcription Lung lung
2 chr1:61917600-61931000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:61919000-61930400 Weak transcription Esophagus oesophagus
4 chr1:61919000-61938600 Weak transcription Colon Smooth Muscle Colon
5 chr1:61919600-61929800 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:61919600-61936000 Weak transcription Right Atrium heart
7 chr1:61920000-61930400 Weak transcription Fetal Heart heart
8 chr1:61920000-61931800 Weak transcription Rectal Smooth Muscle rectum
9 chr1:61920800-61931000 Weak transcription Brain Germinal Matrix brain
10 chr1:61921600-61930200 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr1:61921600-61930400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:61921800-61929800 Weak transcription Hela-S3 cervix
13 chr1:61921800-61930800 Weak transcription Fetal Lung lung
14 chr1:61921800-61938600 Weak transcription NHEK skin
15 chr1:61923000-61934600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:61924200-61933200 Weak transcription Brain Substantia Nigra brain
17 chr1:61927200-61930800 Strong transcription Fetal Stomach stomach
18 chr1:61927400-61932400 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr1:61927600-61932000 Weak transcription Left Ventricle heart
20 chr1:61927600-61935200 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:61928000-61930200 Weak transcription HepG2 liver
22 chr1:61928800-61930400 Weak transcription Liver Liver
23 chr1:61928800-61932800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:61928800-61933600 Weak transcription Fetal Brain Female brain
25 chr1:61929000-61935000 Weak transcription Adipose Nuclei Adipose
26 chr1:61929000-61935200 Weak transcription Stomach Smooth Muscle stomach
27 chr1:61929400-61929800 Enhancers Duodenum Mucosa Duodenum
28 chr1:61929400-61930400 Weak transcription Fetal Muscle Trunk muscle
29 chr1:61929400-61933600 Weak transcription Fetal Muscle Leg muscle
30 chr1:61929400-61938400 Weak transcription Aorta Aorta
31 chr1:61929600-61938800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015