Variant report

Variant rs2477088
Chromosome Location chr1:144936353-144936354
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144933000-144937600 Enhancers Primary T helper naive cells fromperipheralblood blood
2 chr1:144933000-144937600 Enhancers Primary T helper 17 cells PMA-I stimulated --
3 chr1:144933000-144937600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:144933000-144937800 Enhancers Primary T helper naive cells from peripheral blood blood
5 chr1:144933000-144937800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr1:144933200-144936400 Weak transcription Esophagus oesophagus
7 chr1:144933200-144936800 Weak transcription Gastric stomach
8 chr1:144933200-144937000 Enhancers Dnd41 blood
9 chr1:144933200-144937400 Enhancers Primary T killer memory cells from peripheral blood blood
10 chr1:144933200-144937800 Enhancers Primary T cells from cord blood blood
11 chr1:144933200-144937800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr1:144933200-144938200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:144933200-144938200 Weak transcription Fetal Muscle Trunk muscle
14 chr1:144933200-144938400 Enhancers Primary T helper cells fromperipheralblood blood
15 chr1:144933200-144940800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:144933200-144941000 Weak transcription Aorta Aorta
17 chr1:144933200-144941000 Weak transcription Ovary ovary
18 chr1:144933200-144943800 Weak transcription Lung lung
19 chr1:144933400-144936400 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:144933400-144936400 Weak transcription Liver Liver
21 chr1:144933400-144936400 Weak transcription Colonic Mucosa Colon
22 chr1:144933400-144936400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:144933400-144936400 Weak transcription Fetal Lung lung
24 chr1:144933400-144936400 Weak transcription Fetal Muscle Leg muscle
25 chr1:144933400-144936400 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:144933400-144936400 Weak transcription Stomach Smooth Muscle stomach
27 chr1:144933400-144936400 Weak transcription Hela-S3 cervix
28 chr1:144933400-144936400 Weak transcription NHDF-Ad bronchial
29 chr1:144933400-144936600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:144933400-144936600 Weak transcription Brain Hippocampus Middle brain
31 chr1:144933400-144936600 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr1:144933400-144936600 Weak transcription Fetal Stomach stomach
33 chr1:144933400-144936800 Weak transcription Duodenum Mucosa Duodenum
34 chr1:144933400-144937000 Enhancers Primary T killer naive cells fromperipheralblood blood
35 chr1:144933400-144937000 Weak transcription Fetal Brain Female brain
36 chr1:144933400-144937600 Weak transcription Primary hematopoietic stem cells blood
37 chr1:144933400-144939000 Strong transcription K562 blood
38 chr1:144933400-144940000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:144933400-144940000 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:144933400-144940200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:144933400-144940400 Weak transcription Colon Smooth Muscle Colon
42 chr1:144933400-144940600 Weak transcription Brain Substantia Nigra brain
43 chr1:144933400-144940600 Weak transcription Rectal Smooth Muscle rectum
44 chr1:144933600-144936400 Weak transcription Fetal Kidney kidney
45 chr1:144933600-144938400 Weak transcription Fetal Intestine Large intestine
46 chr1:144933800-144936400 Weak transcription Fetal Intestine Small intestine
47 chr1:144934000-144936400 Weak transcription Psoas Muscle Psoas
48 chr1:144934000-144936600 Weak transcription Brain Germinal Matrix brain
49 chr1:144934000-144936600 Weak transcription Fetal Brain Male brain
50 chr1:144934000-144938200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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