Variant report
| Variant | rs2478470 |
|---|---|
| Chromosome Location | chr12:29765639-29765640 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:29731800-29769600 | Weak transcription | Hela-S3 | cervix |
| 2 | chr12:29743200-29769800 | Weak transcription | NHLF | lung |
| 3 | chr12:29744400-29790800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 4 | chr12:29744600-29791000 | Weak transcription | Fetal Muscle Leg | muscle |
| 5 | chr12:29744800-29778200 | Weak transcription | Ovary | ovary |
| 6 | chr12:29752600-29768400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 7 | chr12:29752600-29778200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 8 | chr12:29756200-29766000 | Weak transcription | HSMM | muscle |
| 9 | chr12:29757200-29766200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr12:29757600-29765800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 11 | chr12:29760400-29787400 | Weak transcription | Adipose Nuclei | Adipose |
| 12 | chr12:29760800-29767000 | Weak transcription | Pancreas | Pancrea |
| 13 | chr12:29761800-29778000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 14 | chr12:29762400-29769600 | Weak transcription | HMEC | breast |
| 15 | chr12:29762600-29770400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 16 | chr12:29762800-29770000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 17 | chr12:29763000-29777400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 18 | chr12:29763000-29777600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 19 | chr12:29763200-29766400 | Enhancers | Osteobl | bone |
| 20 | chr12:29763200-29777600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr12:29763400-29766200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 22 | chr12:29763400-29766600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 23 | chr12:29763800-29773000 | Weak transcription | Left Ventricle | heart |
| 24 | chr12:29763800-29778000 | Weak transcription | Fetal Stomach | stomach |
| 25 | chr12:29763800-29786800 | Weak transcription | Spleen | Spleen |
| 26 | chr12:29763800-29793600 | Weak transcription | Right Ventricle | heart |
| 27 | chr12:29764200-29765800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 28 | chr12:29764600-29766400 | Genic enhancers | Muscle Satellite Cultured Cells | -- |
| 29 | chr12:29764600-29766600 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 30 | chr12:29764800-29766600 | Genic enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 31 | chr12:29764800-29766600 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 32 | chr12:29764800-29766800 | Enhancers | NHDF-Ad | bronchial |
| 33 | chr12:29764800-29770200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 34 | chr12:29765000-29780800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 35 | chr12:29765000-29786800 | Weak transcription | HSMMtube | muscle |
| 36 | chr12:29765200-29770800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 37 | chr12:29765200-29773600 | Weak transcription | Right Atrium | heart |
| 38 | chr12:29765200-29777600 | Weak transcription | Colon Smooth Muscle | Colon |
| 39 | chr12:29765200-29778200 | Weak transcription | Aorta | Aorta |
| 40 | chr12:29765200-29785400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 41 | chr12:29765400-29766000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 42 | chr12:29765400-29766200 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 43 | chr12:29765400-29769600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 44 | chr12:29765400-29769800 | Weak transcription | Fetal Heart | heart |
| 45 | chr12:29765400-29777400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 46 | chr12:29765400-29777400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 47 | chr12:29765400-29780800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 48 | chr12:29765600-29766400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 49 | chr12:29765600-29802600 | Weak transcription | Psoas Muscle | Psoas |
