Variant report

Variant rs2480784
Chromosome Location chr1:10570721-10570722
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10566400-10577800 Enhancers Fetal Thymus thymus
2 chr1:10566800-10579800 Enhancers Liver Liver
3 chr1:10567400-10571200 Enhancers Fetal Muscle Leg muscle
4 chr1:10567400-10572600 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr1:10567600-10572200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:10568000-10570800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:10568400-10572400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:10568600-10570800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:10568600-10571000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr1:10568600-10571800 Enhancers Cortex derived primary cultured neurospheres brain
11 chr1:10568800-10573800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:10568800-10576600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr1:10569000-10570800 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr1:10569000-10571000 Enhancers HUES64 Cell Line embryonic stem cell
15 chr1:10569000-10573600 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr1:10569000-10578800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:10569200-10571200 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr1:10569200-10571400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr1:10569400-10571400 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr1:10569400-10571600 Enhancers Fetal Brain Female brain
21 chr1:10569400-10571800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:10569600-10570800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:10569600-10571000 Enhancers Colonic Mucosa Colon
24 chr1:10569600-10572800 Enhancers HMEC breast
25 chr1:10569600-10577800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:10569800-10570800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:10569800-10571400 Enhancers Pancreatic Islets Pancreatic Islet
28 chr1:10569800-10571400 Enhancers HepG2 liver
29 chr1:10569800-10573600 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:10569800-10575000 Weak transcription Fetal Muscle Trunk muscle
31 chr1:10570000-10571000 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr1:10570000-10571200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
33 chr1:10570000-10571200 Enhancers Duodenum Smooth Muscle Duodenum
34 chr1:10570000-10571200 Enhancers Gastric stomach
35 chr1:10570000-10571200 Enhancers Pancreas Pancrea
36 chr1:10570000-10571800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:10570000-10571800 Enhancers Left Ventricle heart
38 chr1:10570000-10571800 Enhancers Right Ventricle heart
39 chr1:10570000-10572000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
40 chr1:10570000-10572000 Enhancers Esophagus oesophagus
41 chr1:10570000-10572000 Enhancers Psoas Muscle Psoas
42 chr1:10570000-10572000 Enhancers Sigmoid Colon Sigmoid Colon
43 chr1:10570000-10572000 Enhancers Spleen Spleen
44 chr1:10570000-10572600 Enhancers Duodenum Mucosa Duodenum
45 chr1:10570000-10572600 Flanking Active TSS Dnd41 blood
46 chr1:10570000-10573800 Enhancers Fetal Intestine Large intestine
47 chr1:10570200-10570800 Enhancers Fetal Heart heart
48 chr1:10570200-10571000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
49 chr1:10570200-10571000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
50 chr1:10570200-10571000 Enhancers Brain Angular Gyrus brain

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