Variant report

Variant rs2488594
Chromosome Location chr9:140405950-140405951
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140376800-140444000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr9:140377000-140437000 Weak transcription Left Ventricle heart
3 chr9:140377200-140420200 Weak transcription Rectal Smooth Muscle rectum
4 chr9:140388400-140425200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr9:140392000-140425800 Weak transcription Primary T cells from cord blood blood
6 chr9:140393000-140417800 Weak transcription Fetal Brain Female brain
7 chr9:140393000-140429400 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr9:140394000-140419800 Weak transcription Primary B cells from peripheral blood blood
9 chr9:140394000-140429200 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr9:140394800-140415600 Weak transcription Brain Angular Gyrus brain
11 chr9:140395000-140414000 Weak transcription Brain Substantia Nigra brain
12 chr9:140395200-140409400 Weak transcription Spleen Spleen
13 chr9:140396200-140409200 Weak transcription Right Ventricle heart
14 chr9:140396400-140429200 Weak transcription Stomach Smooth Muscle stomach
15 chr9:140396800-140406200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr9:140400800-140406200 Weak transcription Stomach Mucosa stomach
17 chr9:140401400-140413600 Weak transcription Gastric stomach
18 chr9:140401600-140406400 Weak transcription Ovary ovary
19 chr9:140402000-140409400 Weak transcription Fetal Stomach stomach
20 chr9:140404000-140408200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr9:140404000-140413400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr9:140404200-140406000 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr9:140404200-140406200 Weak transcription Liver Liver
24 chr9:140404200-140406200 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr9:140404200-140406600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr9:140404200-140406600 Weak transcription Adipose Nuclei Adipose
27 chr9:140404200-140406600 Weak transcription Pancreas Pancrea
28 chr9:140404200-140413800 Weak transcription Primary B cells from cord blood blood
29 chr9:140404200-140414000 Weak transcription Brain Cingulate Gyrus brain
30 chr9:140404200-140414000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr9:140404200-140415000 Weak transcription HSMMtube muscle
32 chr9:140404200-140415600 Weak transcription Brain Hippocampus Middle brain
33 chr9:140404200-140420000 Weak transcription Brain Anterior Caudate brain
34 chr9:140404200-140429200 Weak transcription Aorta Aorta
35 chr9:140404400-140406200 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr9:140404400-140415600 Weak transcription Lung lung
37 chr9:140405400-140406000 ZNF genes & repeats Fetal Intestine Small intestine
38 chr9:140405400-140406000 Enhancers K562 blood
39 chr9:140405400-140406200 Enhancers Duodenum Mucosa Duodenum
40 chr9:140405600-140408200 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr9:140405800-140407200 Enhancers Fetal Adrenal Gland Adrenal Gland

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