Variant report

Variant rs2500347
Chromosome Location chr1:144938320-144938321
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144933200-144938400 Enhancers Primary T helper cells fromperipheralblood blood
2 chr1:144933200-144940800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:144933200-144941000 Weak transcription Aorta Aorta
4 chr1:144933200-144941000 Weak transcription Ovary ovary
5 chr1:144933200-144943800 Weak transcription Lung lung
6 chr1:144933400-144939000 Strong transcription K562 blood
7 chr1:144933400-144940000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:144933400-144940000 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr1:144933400-144940200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:144933400-144940400 Weak transcription Colon Smooth Muscle Colon
11 chr1:144933400-144940600 Weak transcription Brain Substantia Nigra brain
12 chr1:144933400-144940600 Weak transcription Rectal Smooth Muscle rectum
13 chr1:144933600-144938400 Weak transcription Fetal Intestine Large intestine
14 chr1:144934000-144938400 Weak transcription Right Atrium heart
15 chr1:144934000-144940200 Weak transcription Brain Anterior Caudate brain
16 chr1:144934000-144940200 Weak transcription NH-A brain
17 chr1:144934000-144940800 Weak transcription Brain Angular Gyrus brain
18 chr1:144934000-144949000 Weak transcription Spleen Spleen
19 chr1:144934400-144942600 Weak transcription Right Ventricle heart
20 chr1:144935400-144938400 Enhancers ES-WA7 Cell Line embryonic stem cell
21 chr1:144935400-144938600 Enhancers H1 Cell Line embryonic stem cell
22 chr1:144935400-144938600 Enhancers HUES6 Cell Line embryonic stem cell
23 chr1:144935400-144938600 Enhancers Primary neutrophils fromperipheralblood blood
24 chr1:144935400-144938600 Enhancers Adipose Nuclei Adipose
25 chr1:144935400-144938800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:144935400-144938800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr1:144935400-144940400 Strong transcription Left Ventricle heart
28 chr1:144935400-144941000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:144935400-144944000 Genic enhancers Skeletal Muscle Male skeletal muscle
30 chr1:144935400-144944000 Genic enhancers Skeletal Muscle Female skeletal muscle
31 chr1:144936000-144938600 Enhancers Fetal Thymus thymus
32 chr1:144936000-144938800 Genic enhancers HSMMtube muscle
33 chr1:144936000-144939200 Enhancers Small Intestine intestine
34 chr1:144936200-144938400 Enhancers Placenta Amnion Placenta Amnion
35 chr1:144936400-144938600 Genic enhancers Fetal Muscle Leg muscle
36 chr1:144936400-144939200 Enhancers Fetal Kidney kidney
37 chr1:144936400-144939400 Enhancers Rectal Mucosa Donor 31 rectum
38 chr1:144936400-144939600 Enhancers Liver Liver
39 chr1:144936400-144939800 Enhancers Psoas Muscle Psoas
40 chr1:144936600-144939200 Strong transcription Brain Germinal Matrix brain
41 chr1:144936600-144939400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:144936600-144939400 Enhancers HepG2 liver
43 chr1:144936600-144948800 Weak transcription Pancreas Pancrea
44 chr1:144936800-144938400 Enhancers Duodenum Mucosa Duodenum
45 chr1:144936800-144938400 Weak transcription Fetal Intestine Small intestine
46 chr1:144936800-144939000 Strong transcription Fetal Heart heart
47 chr1:144936800-144941000 Weak transcription Hela-S3 cervix
48 chr1:144937000-144938400 Enhancers HUES64 Cell Line embryonic stem cell
49 chr1:144937000-144938400 Weak transcription Colonic Mucosa Colon
50 chr1:144937000-144938600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links