The 2.0 version of rSNPBase

Variant report

Variant rs2501942
Chromosome Location chr9:78985385-78985386
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:78964400-78986400 Weak transcription Colonic Mucosa Colon
2 chr9:78969200-78988000 Weak transcription Aorta Aorta
3 chr9:78978800-78987000 Weak transcription Small Intestine intestine
4 chr9:78979400-78986800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr9:78980400-78986800 Weak transcription HSMM muscle
6 chr9:78980400-78987000 Weak transcription HSMMtube muscle
7 chr9:78980400-78990000 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr9:78981200-78986800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr9:78981600-78988000 Weak transcription K562 blood
10 chr9:78983200-78985400 Enhancers Fetal Intestine Large intestine
11 chr9:78983200-78985600 Enhancers Duodenum Mucosa Duodenum
12 chr9:78983800-78985800 Enhancers Liver Liver
13 chr9:78983800-78985800 Enhancers HepG2 liver
14 chr9:78983800-78986000 Enhancers Stomach Mucosa stomach
15 chr9:78983800-78986400 Enhancers A549 lung
16 chr9:78983800-78989000 Enhancers Fetal Lung lung
17 chr9:78984000-78986200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr9:78984400-78985600 Enhancers GM12878-XiMat blood
19 chr9:78984400-78985600 Enhancers NH-A brain
20 chr9:78984400-78989600 Enhancers Hela-S3 cervix
21 chr9:78984600-78986800 Weak transcription Osteobl bone
22 chr9:78984600-78993200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr9:78984800-78985400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
24 chr9:78984800-78985800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr9:78984800-78986800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr9:78984800-78986800 Weak transcription HUVEC blood vessel
27 chr9:78984800-78987200 Weak transcription NHLF lung
28 chr9:78984800-78987800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr9:78984800-78989800 Weak transcription Left Ventricle heart
30 chr9:78985000-78986000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr9:78985000-78986800 Weak transcription Fetal Stomach stomach
32 chr9:78985000-78986800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr9:78985000-78987000 Weak transcription Fetal Heart heart
34 chr9:78985000-78987400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr9:78985000-78988000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr9:78985000-78988000 Weak transcription Fetal Muscle Leg muscle
37 chr9:78985000-78989000 Weak transcription Pancreas Pancrea
38 chr9:78985000-78989600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr9:78985000-78989600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr9:78985000-78989800 Weak transcription Primary hematopoietic stem cells blood
41 chr9:78985200-78985600 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr9:78985200-78985600 Weak transcription Fetal Intestine Small intestine
43 chr9:78985200-78987600 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015