Variant report

Variant	rs2505706
Chromosome Location	chr10:37823147-37823148
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:37822844..37823593-chr8:38687776..38688471,2	K562	blood:
2	chr10:37822760..37823349-chr10:37996545..37997377,2	MCF-7	breast:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2505703	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895030	chr10:37715737-38674609	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv1045684	chr10:37765361-38426204	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	nsv540564	chr10:37765361-38426204	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
4	esv1807703	chr10:37807847-37823398	Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv1810701	chr10:37808117-37823398	ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv8617	chr10:37815801-37877331	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3525187	chr10:37816096-37824594	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3493729	chr10:37816423-37823609	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3525189	chr10:37816427-37823603	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3525186	chr10:37816441-37823641	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3493618	chr10:37816473-37823602	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3493951	chr10:37816474-37823591	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv1810454	chr10:37816484-37823360	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv1813840	chr10:37816484-37823360	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv3493840	chr10:37816495-37823632	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv3525188	chr10:37816496-37823565	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv3525190	chr10:37816496-37823565	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
18	nsv437664	chr10:37816510-37840199	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
19	nsv437665	chr10:37816510-37840199	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
20	esv15909	chr10:37816550-37823425	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
21	esv3494062	chr10:37816564-37823512	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
22	esv1812617	chr10:37816684-37823160	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv1806261	chr10:37816684-37824980	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
24	esv1813461	chr10:37816684-37860065	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
25	esv1806191	chr10:37817882-37823398	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
26	esv1807090	chr10:37817882-37823398	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
27	esv1810419	chr10:37817882-37823398	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
28	esv1810429	chr10:37817882-37823398	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
29	esv1810514	chr10:37817882-37823398	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
30	esv1811369	chr10:37817882-37823398	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
31	esv1806900	chr10:37817882-37826492	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
32	esv1807404	chr10:37817882-37826492	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
33	esv1809925	chr10:37817882-37826492	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
34	esv1814661	chr10:37817882-37826492	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
35	esv3693052	chr10:37818201-37834376	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
36	esv1809340	chr10:37819429-37823360	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:37823000-37825200	Enhancers	ES-I3 Cell Line	embryonic stem cell

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