Variant report

Variant	rs2509718
Chromosome Location	chr11:67418178-67418179
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:67417661-67418467	GM18505	blood:	n/a	n/a
2	MAX	chr11:67417904-67418274	HepG2	liver:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
3	ELF1	chr11:67417994-67418278	K562	blood:	n/a	chr11:67418142-67418155
4	MAX	chr11:67417896-67418199	A549	lung:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
5	MTA3	chr11:67415135-67418528	GM12878	blood:	n/a	n/a
6	POLR2A	chr11:67417321-67418505	GM12892	blood:	n/a	n/a
7	POLR2A	chr11:67417664-67418401	GM18951	blood:	n/a	n/a
8	RUNX3	chr11:67416514-67418425	GM12878	blood:	n/a	n/a
9	MAX	chr11:67417768-67418358	A549	lung:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
10	EBF1	chr11:67417915-67418449	GM12878	blood:	n/a	n/a
11	MXI1	chr11:67417905-67418321	GM12878	blood:	n/a	chr11:67418052-67418061 chr11:67418054-67418063 chr11:67418054-67418063
12	MYC	chr11:67418144-67418243	HepG2	liver:	n/a	n/a
13	HNF4A	chr11:67417975-67418426	HepG2	liver:	n/a	chr11:67418199-67418214 chr11:67418200-67418208 chr11:67418199-67418214 chr11:67418201-67418213 chr11:67418200-67418212 chr11:67418200-67418213 chr11:67418199-67418214 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418096-67418104 chr11:67418201-67418213 chr11:67418198-67418216 chr11:67418201-67418213 chr11:67418199-67418214 chr11:67418201-67418213 chr11:67418201-67418214 chr11:67418200-67418214
14	IRF1	chr11:67418053-67418472	K562	blood:	n/a	chr11:67418286-67418300 chr11:67418286-67418299 chr11:67418285-67418305 chr11:67418286-67418299 chr11:67418286-67418297 chr11:67418287-67418301 chr11:67418286-67418299 chr11:67418286-67418299
15	MAX	chr11:67417934-67418202	K562	blood:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
16	HEY1	chr11:67417708-67418370	HepG2	liver:	n/a	n/a
17	MAX	chr11:67417880-67418258	GM12878	blood:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
18	TCF12	chr11:67417788-67418557	A549	lung:	n/a	chr11:67418288-67418295
19	NFIC	chr11:67417969-67418277	HepG2	liver:	n/a	n/a
20	MYC	chr11:67417989-67418250	K562	blood:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
21	POLR2A	chr11:67417696-67418349	GM12878	blood:	n/a	n/a
22	POLR2A	chr11:67417659-67418389	GM15510	blood:	n/a	n/a
23	RUNX3	chr11:67417845-67418382	GM12878	blood:	n/a	n/a
24	HNF4A	chr11:67417973-67418413	HepG2	liver:	n/a	chr11:67418199-67418214 chr11:67418200-67418208 chr11:67418199-67418214 chr11:67418201-67418213 chr11:67418200-67418212 chr11:67418200-67418213 chr11:67418199-67418214 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418096-67418104 chr11:67418201-67418213 chr11:67418198-67418216 chr11:67418201-67418213 chr11:67418199-67418214 chr11:67418201-67418213 chr11:67418201-67418214 chr11:67418200-67418214
25	POLR2A	chr11:67418016-67418184	K562	blood:	n/a	n/a
26	EBF1	chr11:67418090-67418366	GM12878	blood:	n/a	n/a
27	USF1	chr11:67417932-67418187	HepG2	liver:	n/a	chr11:67418052-67418063
28	POLR2A	chr11:67418043-67418305	HepG2	liver:	n/a	n/a
29	POLR2A	chr11:67417614-67418354	GM12878	blood:	n/a	n/a
30	POLR2A	chr11:67417674-67418358	GM12878	blood:	n/a	n/a
31	TBP	chr11:67418087-67418367	HepG2	liver:	n/a	n/a
32	HNF4G	chr11:67417878-67418437	HepG2	liver:	n/a	chr11:67418199-67418214 chr11:67418200-67418208 chr11:67418199-67418214 chr11:67418201-67418213 chr11:67418200-67418212 chr11:67418200-67418213 chr11:67418199-67418214 chr11:67418200-67418215 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418096-67418104 chr11:67418201-67418213 chr11:67418198-67418216 chr11:67418201-67418213 chr11:67418201-67418213 chr11:67418201-67418214 chr11:67418200-67418214
33	MAX	chr11:67417916-67418264	K562	blood:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
34	POLR2A	chr11:67416299-67418548	GM12892	blood:	n/a	n/a
35	MYC	chr11:67417888-67418311	K562	blood:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
36	POLR2A	chr11:67417672-67418386	GM19193	blood:	n/a	n/a
37	E2F6	chr11:67417908-67418195	K562	blood:	n/a	n/a
38	ELF1	chr11:67417891-67418409	GM12878	blood:	n/a	chr11:67418142-67418155
39	HNF4G	chr11:67417991-67418380	HepG2	liver:	n/a	chr11:67418199-67418214 chr11:67418200-67418208 chr11:67418199-67418214 chr11:67418201-67418213 chr11:67418200-67418212 chr11:67418200-67418213 chr11:67418199-67418214 chr11:67418200-67418215 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418096-67418104 chr11:67418201-67418213 chr11:67418198-67418216 chr11:67418201-67418213 chr11:67418201-67418213 chr11:67418201-67418214 chr11:67418200-67418214
40	MYBL2	chr11:67417972-67418438	HepG2	liver:	n/a	n/a
41	POLR2A	chr11:67417586-67418377	GM12892	blood:	n/a	n/a
42	POLR2A	chr11:67417553-67418430	GM12892	blood:	n/a	n/a
43	HDAC2	chr11:67417967-67418420	HepG2	liver:	n/a	n/a
44	HNF4A	chr11:67418041-67418417	HepG2	liver:	n/a	chr11:67418199-67418214 chr11:67418200-67418208 chr11:67418199-67418214 chr11:67418201-67418213 chr11:67418200-67418212 chr11:67418200-67418213 chr11:67418199-67418214 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418199-67418214 chr11:67418201-67418214 chr11:67418096-67418104 chr11:67418201-67418213 chr11:67418198-67418216 chr11:67418201-67418213 chr11:67418199-67418214 chr11:67418201-67418213 chr11:67418201-67418214 chr11:67418200-67418214
45	MAX	chr11:67417795-67418347	K562	blood:	n/a	chr11:67418053-67418063 chr11:67418052-67418062 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062 chr11:67418052-67418063 chr11:67418053-67418062
46	RCOR1	chr11:67418039-67418234	K562	blood:	n/a	n/a
47	POLR2A	chr11:67417659-67418449	GM12878	blood:	n/a	n/a
48	IRF1	chr11:67418105-67418405	K562	blood:	n/a	chr11:67418286-67418300 chr11:67418286-67418299 chr11:67418285-67418305 chr11:67418286-67418299 chr11:67418286-67418297 chr11:67418287-67418301 chr11:67418286-67418299 chr11:67418286-67418299
49	BCLAF1	chr11:67417791-67418254	GM12878	blood:	n/a	chr11:67418101-67418115
50	E2F6	chr11:67417767-67418402	A549	lung:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:67418148-67418198	MCF-7	breast:	n/a
2	chr11:67418148-67418198	BE2_C	brain:	n/a
3	chr11:67418148-67418198	HAEpiC	amniotic membrane:	n/a
4	chr11:67418140-67418190	NH-A	brain:	n/a
5	chr11:67418140-67418190	GM12891	blood:	n/a
6	chr11:67418148-67418198	HIPEpiC	eye:	n/a
7	chr11:67418148-67418198	HCT-116	colon:	n/a
8	chr11:67418140-67418190	NHBE	bronchial:	n/a
9	chr11:67418140-67418190	AG10803	skin:	n/a
10	chr11:67418140-67418190	HEK293	kidney:	embryo
11	chr11:67418148-67418198	AG04449	skin:	fetal
12	chr11:67418140-67418190	MCF10A-Er-Src	breast:	n/a
13	chr11:67418140-67418190	GM12892	blood:	n/a
14	chr11:67418148-67418198	NH-A	brain:	n/a
15	chr11:67418140-67418190	AG09319	gingival:	n/a
16	chr11:67418140-67418190	BJ	skin:	n/a
17	chr11:67418140-67418190	BE2_C	brain:	n/a
18	chr11:67418140-67418190	AG04449	skin:	fetal
19	chr11:67418140-67418190	AoSMC	blood vessel:	n/a
20	chr11:67418148-67418198	Jurkat	blood:	n/a
21	chr11:67418148-67418198	CMK	blood:	n/a
22	chr11:67418148-67418198	NHDF-neo	bronchial:	n/a
23	chr11:67418148-67418198	SK-N-SH	brain:	n/a
24	chr11:67418148-67418198	AG04450	lung:	fetal
25	chr11:67418148-67418198	A549	lung:	n/a
26	chr11:67418140-67418190	HEEpiC	esophagus:	n/a
27	chr11:67418140-67418190	Hela-S3	cervix:	n/a
28	chr11:67418140-67418190	RPTEC	kidney:	n/a
29	chr11:67418148-67418198	HRPEpiC	eye:	n/a
30	chr11:67418140-67418190	HL-60	blood:	n/a
31	chr11:67418148-67418198	ProgFib	skin:	n/a
32	chr11:67418140-67418190	HNPCEpiC	eye:	n/a
33	chr11:67418148-67418198	HMEC	breast:	n/a
34	chr11:67418140-67418190	HepG2	liver:	n/a
35	chr11:67418140-67418190	CMK	blood:	n/a
36	chr11:67418140-67418190	A549	lung:	n/a
37	chr11:67418148-67418198	SK-N-MC	brain:	n/a
38	chr11:67418148-67418198	PFSK-1	brain:	n/a
39	chr11:67418140-67418190	AG04450	lung:	fetal
40	chr11:67418148-67418198	K562	blood:	n/a
41	chr11:67418140-67418190	HCPEpiC	choroid plexus:	n/a
42	chr11:67418148-67418198	AoSMC	blood vessel:	n/a
43	chr11:67418140-67418190	U87	brain:	n/a
44	chr11:67418140-67418190	GM19239	blood:	n/a
45	chr11:67418148-67418198	HRCEpiC	kidney:	n/a
46	chr11:67418148-67418198	HEK293	kidney:	embryo
47	chr11:67418148-67418198	U87	brain:	n/a
48	chr11:67418148-67418198	GM12878	blood:	n/a
49	chr11:67418148-67418198	Caco-2	colon:	n/a
50	chr11:67418140-67418190	NT2-D1	testis:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:67396543..67400484-chr11:67414425..67419634,5	MCF-7	breast:
2	chr11:67412966..67415782-chr11:67417103..67418705,2	K562	blood:

Variant related genes	Relation type
ACY3	TF binding region
ACY3	CpG island
ENSG00000167799	Chromatin interaction
ENSG00000132744	Chromatin interaction

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11601010	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11828473	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551886	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1551888	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17856219	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1979375	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1979376	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2126716	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2252577	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2509719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2509720	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3127	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3741172	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3888976	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4520603	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4646823	0.97[EUR][1000 genomes]
rs4930211	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4930212	0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4930465	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61894521	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61894522	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61894523	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61894524	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61894527	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61894528	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7114210	0.81[AMR][1000 genomes]
rs7127140	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs866907	0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:41 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531397	chr11:66653381-67465721	Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	271 gene(s)	inside rSNPs	diseases
2	nsv897801	chr11:67033076-67432479	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	236 gene(s)	inside rSNPs	diseases
3	nsv897808	chr11:67155210-67419855	Flanking Active TSS Strong transcription Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
4	esv2422195	chr11:67234322-67626901	Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	146 gene(s)	inside rSNPs	diseases
5	nsv1041988	chr11:67319916-67749246	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
6	nsv897814	chr11:67339949-67460529	Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
7	nsv1050463	chr11:67343421-67717338	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	79 gene(s)	inside rSNPs	diseases
8	nsv1038189	chr11:67345320-67749246	Transcr. at gene 5' and 3' Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	81 gene(s)	inside rSNPs	diseases
9	nsv1047236	chr11:67345320-67764068	Bivalent Enhancer Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
10	nsv555268	chr11:67346743-67752972	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	81 gene(s)	inside rSNPs	diseases
11	nsv1036101	chr11:67346813-67828351	Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
12	nsv541079	chr11:67346813-67828351	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
13	nsv1053811	chr11:67349444-67749246	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	81 gene(s)	inside rSNPs	diseases
14	esv1817852	chr11:67349899-67626567	Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
15	nsv468606	chr11:67352689-67816936	Active TSS Flanking Bivalent TSS/Enh Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
16	nsv555269	chr11:67352689-67816936	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
17	nsv897816	chr11:67353579-67460529	Enhancers Active TSS Flanking Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
18	nsv1041887	chr11:67357365-67464893	Flanking Active TSS Genic enhancers Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
19	nsv541080	chr11:67357365-67464893	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
20	nsv529452	chr11:67358204-67465721	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
21	nsv492253	chr11:67358204-67574402	Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
22	nsv1043487	chr11:67360899-67662476	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	71 gene(s)	inside rSNPs	diseases
23	nsv897818	chr11:67372477-67419855	Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
24	nsv468607	chr11:67372477-67423892	Flanking Active TSS Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
25	nsv555270	chr11:67372477-67423892	Enhancers Active TSS Flanking Active TSS Genic enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
26	nsv897819	chr11:67372477-67426797	Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
27	nsv468608	chr11:67372477-67433869	Genic enhancers Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
28	nsv555271	chr11:67372477-67433869	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
29	nsv897820	chr11:67372477-67460529	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
30	nsv897821	chr11:67378594-67430762	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
31	nsv897822	chr11:67378594-67441553	Genic enhancers Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
32	nsv897823	chr11:67378594-67460529	Enhancers Bivalent Enhancer Active TSS Genic enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
33	nsv897824	chr11:67379575-67418202	Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	40 gene(s)	inside rSNPs	diseases
34	nsv897825	chr11:67381110-67460529	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
35	nsv468609	chr11:67395714-67433869	Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
36	nsv555273	chr11:67395714-67433869	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
37	nsv469963	chr11:67395714-67438195	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
38	nsv897826	chr11:67408791-67462549	Enhancers Genic enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
39	esv1812708	chr11:67414492-67441553	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
40	esv3356225	chr11:67414976-67419374	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
41	esv3334811	chr11:67415776-67418674	Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:67398800-67418600	Weak transcription	Right Atrium	heart
2	chr11:67411800-67419600	Enhancers	Primary B cells from cord blood	blood
3	chr11:67412200-67420600	Enhancers	Primary hematopoietic stem cells	blood
4	chr11:67416400-67418400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr11:67416600-67418400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
6	chr11:67417000-67418400	Flanking Active TSS	GM12878-XiMat	blood
7	chr11:67417000-67419200	Flanking Active TSS	Dnd41	blood
8	chr11:67417200-67418200	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr11:67417200-67418200	Flanking Active TSS	Colonic Mucosa	Colon
10	chr11:67417400-67418200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr11:67417400-67418200	Flanking Active TSS	Duodenum Mucosa	Duodenum
12	chr11:67417400-67418400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr11:67417400-67418400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
14	chr11:67417600-67418400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr11:67417600-67418400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
16	chr11:67417600-67418400	Active TSS	Pancreatic Islets	Pancreatic Islet
17	chr11:67417600-67423400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr11:67417800-67418200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
19	chr11:67417800-67418200	Active TSS	Fetal Kidney	kidney
20	chr11:67417800-67418200	Flanking Active TSS	Placenta	Placenta
21	chr11:67417800-67418200	Bivalent/Poised TSS	Fetal Stomach	stomach
22	chr11:67417800-67418200	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
23	chr11:67417800-67418400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr11:67417800-67418400	Enhancers	iPS-20b Cell Line	embryonic stem cell
25	chr11:67417800-67418400	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
26	chr11:67417800-67418400	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
27	chr11:67417800-67418400	Active TSS	Primary T killer naive cells fromperipheralblood	blood
28	chr11:67417800-67418400	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr11:67417800-67418400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr11:67417800-67418400	Active TSS	Muscle Satellite Cultured Cells	--
31	chr11:67417800-67418400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr11:67417800-67418400	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr11:67417800-67418400	Active TSS	Brain Anterior Caudate	brain
34	chr11:67417800-67418400	Active TSS	Brain Cingulate Gyrus	brain
35	chr11:67417800-67418400	Active TSS	Brain Inferior Temporal Lobe	brain
36	chr11:67417800-67418400	Active TSS	Duodenum Smooth Muscle	Duodenum
37	chr11:67417800-67418400	Active TSS	Ovary	ovary
38	chr11:67417800-67418400	Active TSS	Rectal Smooth Muscle	rectum
39	chr11:67417800-67418400	Flanking Bivalent TSS/Enh	Skeletal Muscle Female	skeletal muscle
40	chr11:67417800-67418400	Active TSS	NHLF	lung
41	chr11:67417800-67418600	Active TSS	Breast Myoepithelial Primary Cells	Breast
42	chr11:67417800-67418600	Active TSS	Primary T cells from cord blood	blood
43	chr11:67417800-67418600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
44	chr11:67417800-67418600	Bivalent/Poised TSS	Adipose Nuclei	Adipose
45	chr11:67417800-67418600	Active TSS	Pancreas	Pancrea
46	chr11:67417800-67418600	Active TSS	Stomach Mucosa	stomach
47	chr11:67417800-67418800	Flanking Active TSS	Primary B cells from peripheral blood	blood
48	chr11:67417800-67418800	Active TSS	Brain Hippocampus Middle	brain
49	chr11:67417800-67418800	Active TSS	A549	lung
50	chr11:67417800-67420400	Enhancers	Primary hematopoietic stem cells short term culture	blood

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