Variant report

Variant rs2526481
Chromosome Location chr17:20127018-20127019
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20106800-20130200 Weak transcription Fetal Stomach stomach
2 chr17:20106800-20131400 Weak transcription Fetal Intestine Large intestine
3 chr17:20107600-20131600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr17:20108000-20130200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr17:20108000-20130200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr17:20108400-20131400 Weak transcription Duodenum Mucosa Duodenum
7 chr17:20109600-20135200 Weak transcription Gastric stomach
8 chr17:20110800-20130400 Weak transcription HSMMtube muscle
9 chr17:20111600-20127400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr17:20111600-20166000 Weak transcription Right Ventricle heart
11 chr17:20112000-20130200 Weak transcription NH-A brain
12 chr17:20115400-20135000 Weak transcription Fetal Intestine Small intestine
13 chr17:20115600-20127200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr17:20115600-20127200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr17:20115600-20131600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr17:20115600-20132800 Weak transcription Primary hematopoietic stem cells blood
17 chr17:20115800-20127200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr17:20115800-20131400 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr17:20116000-20130200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr17:20117000-20130800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr17:20117200-20131600 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr17:20118600-20134200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr17:20118800-20127200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr17:20120200-20127200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr17:20120800-20131600 Weak transcription GM12878-XiMat blood
26 chr17:20121000-20127200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr17:20121000-20127200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr17:20121000-20128400 Weak transcription H9 Cell Line embryonic stem cell
29 chr17:20121200-20127200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr17:20121200-20127200 Weak transcription A549 lung
31 chr17:20121400-20127400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr17:20121400-20127400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr17:20122000-20127200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr17:20122000-20127200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr17:20122000-20128400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr17:20122200-20128600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr17:20122400-20127800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr17:20123000-20127200 Weak transcription Brain Cingulate Gyrus brain
39 chr17:20124600-20128000 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr17:20125200-20144000 Weak transcription Small Intestine intestine
41 chr17:20125400-20129600 Strong transcription Primary monocytes fromperipheralblood blood
42 chr17:20125600-20128800 Enhancers Brain Anterior Caudate brain
43 chr17:20125600-20129200 Enhancers HUES6 Cell Line embryonic stem cell
44 chr17:20125600-20129400 Enhancers HUES48 Cell Line embryonic stem cell
45 chr17:20125600-20130600 Enhancers Cortex derived primary cultured neurospheres brain
46 chr17:20125800-20128200 Enhancers Brain Inferior Temporal Lobe brain
47 chr17:20126200-20127400 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr17:20126200-20127400 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr17:20126200-20127400 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr17:20126200-20127400 Weak transcription iPS-18 Cell Line embryonic stem cell

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