Variant report

Variant	rs2534573
Chromosome Location	chr7:38370815-38370816
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr7:38370333-38370858	K562	blood:	n/a	chr7:38370807-38370815
2	CTCF	chr7:38370391-38371079	K562	blood:	n/a	chr7:38370807-38370815
3	UBTF	chr7:38370555-38370821	K562	blood:	n/a	n/a
4	ELF1	chr7:38370500-38370823	GM12878	blood:	n/a	chr7:38370545-38370558
5	TAF1	chr7:38370488-38370856	H1-hESC	embryonic stem cell:	n/a	n/a
6	CTCF	chr7:38370800-38370950	HEK293	kidney:	n/a	chr7:38370807-38370815
7	RAD21	chr7:38370424-38370883	H1-hESC	embryonic stem cell:	n/a	n/a
8	CTCF	chr7:38370375-38370853	H1-hESC	embryonic stem cell:	n/a	chr7:38370807-38370815
9	CTCF	chr7:38370396-38370823	K562	blood:	n/a	chr7:38370807-38370815
10	CBX3	chr7:38370432-38370850	K562	blood:	n/a	n/a
11	ELF1	chr7:38370338-38370832	K562	blood:	n/a	chr7:38370545-38370558
12	ZNF143	chr7:38370420-38370993	H1-hESC	embryonic stem cell:	n/a	n/a
13	CTCF	chr7:38370390-38370893	H1-hESC	embryonic stem cell:	n/a	chr7:38370807-38370815
14	ZNF143	chr7:38370445-38370847	K562	blood:	n/a	n/a
15	CTCF	chr7:38370680-38370830	HA-sp	spinal cord:	n/a	chr7:38370807-38370815
16	BHLHE40	chr7:38370489-38370864	K562	blood:	n/a	n/a
17	UBTF	chr7:38370339-38370849	K562	blood:	n/a	n/a
18	TAF1	chr7:38370449-38370884	H1-hESC	embryonic stem cell:	n/a	n/a
19	TCF12	chr7:38370604-38370866	H1-hESC	embryonic stem cell:	n/a	n/a
20	TBP	chr7:38370551-38370980	H1-hESC	embryonic stem cell:	n/a	chr7:38370953-38370964
21	RAD21	chr7:38370464-38370840	H1-hESC	embryonic stem cell:	n/a	n/a
22	POLR2A	chr7:38370597-38370876	H1-hESC	embryonic stem cell:	n/a	n/a
23	ZNF263	chr7:38370485-38370890	HEK293-T-REx	kidney:	n/a	n/a
24	RCOR1	chr7:38370374-38371077	K562	blood:	n/a	n/a
25	MAX	chr7:38370466-38370829	K562	blood:	n/a	n/a
26	JUND	chr7:38370503-38371063	H1-hESC	embryonic stem cell:	n/a	chr7:38370505-38370514
27	RAD21	chr7:38370361-38370907	H1-hESC	embryonic stem cell:	n/a	n/a
28	MYC	chr7:38370395-38370824	K562	blood:	n/a	n/a
29	POLR2A	chr7:38370335-38371128	H1-hESC	embryonic stem cell:	n/a	n/a
30	MAZ	chr7:38370419-38370980	K562	blood:	n/a	n/a
31	POLR2A	chr7:38370572-38370896	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr7:38370363-38370856	K562	blood:	n/a	chr7:38370807-38370815

No.	Distal block	Cell Line	Cell type
1	chr7:38369534..38372460-chr7:38378778..38381886,3	K562	blood:
2	chr7:38350441..38353889-chr7:38368470..38373744,5	K562	blood:
3	chr7:38369664..38372472-chr7:38373590..38376789,3	K562	blood:

Variant related genes	Relation type
TRGV8	TF binding region
ENSG00000272908	TF binding region
ENSG00000231916	Chromatin interaction
ENSG00000249978	Chromatin interaction
ENSG00000226212	Chromatin interaction

Extended variants
information (count: 118 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10487742	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11975431	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11977173	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11977240	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11979777	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11982191	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11984094	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17171329	0.86[EUR][1000 genomes]
rs2534574	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2534576	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2534577	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2735165	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2735166	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2735167	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2735169	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2735170	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2735171	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2735172	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2735173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34253012	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34580406	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35281521	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55658930	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55791679	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55840567	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56378175	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57596277	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58237078	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59616631	0.86[EUR][1000 genomes]
rs60104039	0.86[EUR][1000 genomes]
rs61232836	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6462832	0.86[EUR][1000 genomes]
rs6948465	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6966279	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6973348	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6973744	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73692530	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73692532	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73692534	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73692535	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73692536	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73692537	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73694011	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73694012	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73694013	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73694015	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73694016	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73694017	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73694019	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:69 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016355	chr7:38168232-38372719	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
2	esv2758112	chr7:38218703-38523455	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
3	esv2759524	chr7:38218703-38523455	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
4	nsv427776	chr7:38218703-38523455	Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
5	nsv830964	chr7:38218708-38390518	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
6	nsv1030349	chr7:38227528-38372719	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
7	nsv538818	chr7:38227528-38372719	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
8	nsv1025974	chr7:38227528-38503472	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
9	nsv538819	chr7:38227528-38503472	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
10	nsv932229	chr7:38248340-38727527	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
11	nsv1027803	chr7:38257707-38410660	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
12	nsv538820	chr7:38257707-38410660	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
13	nsv1020990	chr7:38257707-38503472	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
14	nsv870213	chr7:38261012-38382508	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
15	nsv433062	chr7:38268395-38371334	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
16	nsv433054	chr7:38268395-38403367	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
17	nsv433049	chr7:38268395-38404971	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
18	esv1793647	chr7:38269292-38383243	Active TSS Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
19	esv1804547	chr7:38269292-38383243	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
20	esv1822202	chr7:38269292-38383243	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
21	esv1827702	chr7:38269292-38383243	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
22	esv1838074	chr7:38269292-38383243	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
23	esv1849699	chr7:38269292-38383243	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
24	nsv433072	chr7:38271544-38371334	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
25	esv2755783	chr7:38271544-38404971	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
26	esv1000823	chr7:38271623-38390120	Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
27	esv33146	chr7:38288048-38406196	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
28	nsv820039	chr7:38289515-38411222	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
29	nsv824069	chr7:38290446-38370867	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
30	nsv824070	chr7:38290446-38378882	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
31	nsv824072	chr7:38293736-38371145	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
32	nsv824073	chr7:38293736-38380752	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
33	nsv824074	chr7:38293736-38404608	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
34	esv2757222	chr7:38294079-38418165	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
35	nsv1016366	chr7:38294089-38387431	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
36	nsv1016455	chr7:38294089-38402496	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
37	nsv433085	chr7:38294114-38371334	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
38	nsv433104	chr7:38294114-38384841	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
39	nsv433096	chr7:38294114-38386791	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
40	esv34699	chr7:38311060-38386791	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
41	nsv429724	chr7:38311098-38371334	Weak transcription Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
42	nsv429726	chr7:38311098-38384841	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
43	nsv429718	chr7:38311098-38404971	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
44	nsv870301	chr7:38315298-38376501	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
45	nsv1019694	chr7:38317558-38387431	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
46	nsv818497	chr7:38318590-38380446	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
47	nsv519863	chr7:38318590-38417556	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
48	nsv1016931	chr7:38319339-38398047	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
49	nsv1019941	chr7:38319437-38472680	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
50	nsv1031936	chr7:38319437-38503472	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38366800-38371000	Enhancers	Primary T cells from cord blood	blood
2	chr7:38366800-38375200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
3	chr7:38367400-38371800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr7:38367600-38371600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr7:38368400-38371000	Enhancers	Adipose Nuclei	Adipose
6	chr7:38368400-38371400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr7:38369200-38375400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr7:38369600-38371000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr7:38369800-38373800	Transcr. at gene 5' and 3'	Primary Natural Killer cells fromperipheralblood	blood
10	chr7:38370000-38371200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
11	chr7:38370000-38371600	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr7:38370000-38372600	Enhancers	K562	blood
13	chr7:38370200-38371000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr7:38370200-38371800	Flanking Active TSS	Fetal Thymus	thymus
15	chr7:38370200-38373800	Weak transcription	Primary monocytes fromperipheralblood	blood
16	chr7:38370200-38373800	Enhancers	Dnd41	blood
17	chr7:38370200-38374000	Weak transcription	Monocytes-CD14+_RO01746	blood
18	chr7:38370400-38371200	Enhancers	Primary T helper cells fromperipheralblood	blood
19	chr7:38370400-38371600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
20	chr7:38370400-38371600	Enhancers	A549	lung
21	chr7:38370400-38372000	Enhancers	H1 Cell Line	embryonic stem cell
22	chr7:38370400-38372000	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr7:38370400-38372000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr7:38370400-38374800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
25	chr7:38370600-38371200	Active TSS	Thymus	Thymus
26	chr7:38370600-38372000	Enhancers	Primary hematopoietic stem cells	blood
27	chr7:38370800-38371000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr7:38370800-38371000	Active TSS	Fetal Muscle Leg	muscle
29	chr7:38370800-38371200	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
30	chr7:38370800-38371200	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
31	chr7:38370800-38371200	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
32	chr7:38370800-38371200	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
33	chr7:38370800-38371200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr7:38370800-38371200	Active TSS	Primary T killer memory cells from peripheral blood	blood
35	chr7:38370800-38371400	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
36	chr7:38370800-38371600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
37	chr7:38370800-38371800	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
38	chr7:38370800-38371800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr7:38370800-38371800	Enhancers	H9 Cell Line	embryonic stem cell
40	chr7:38370800-38371800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
41	chr7:38370800-38371800	Active TSS	Primary T helper naive cells from peripheral blood	blood
42	chr7:38370800-38372600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
43	chr7:38370800-38372800	Enhancers	Fetal Intestine Large	intestine
44	chr7:38370800-38374200	Weak transcription	Placenta	Placenta

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