The 2.0 version of rSNPBase

Variant report

Variant rs2535300
Chromosome Location chr6:31059145-31059146
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31040600-31062400 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr6:31051000-31062200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr6:31052000-31061000 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr6:31055200-31059400 Weak transcription Duodenum Mucosa Duodenum
5 chr6:31055200-31060600 Weak transcription Primary hematopoietic stem cells blood
6 chr6:31055200-31060600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:31055200-31062000 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr6:31055200-31062200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:31055400-31059800 Weak transcription A549 lung
10 chr6:31055400-31060800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr6:31055400-31061000 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr6:31055400-31061000 Weak transcription Brain Hippocampus Middle brain
13 chr6:31055400-31062400 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr6:31055600-31060600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr6:31055800-31059400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr6:31055800-31059400 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr6:31055800-31060600 Weak transcription HUVEC blood vessel
18 chr6:31055800-31061000 Weak transcription Primary monocytes fromperipheralblood blood
19 chr6:31055800-31061000 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr6:31055800-31061800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr6:31058400-31061400 Enhancers Rectal Mucosa Donor 31 rectum
22 chr6:31058600-31059200 Enhancers Stomach Mucosa stomach
23 chr6:31058600-31059400 Enhancers HepG2 liver
24 chr6:31058800-31060200 Enhancers Rectal Mucosa Donor 29 rectum
25 chr6:31058800-31062000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr6:31058800-31066400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr6:31059000-31059600 Enhancers K562 blood
28 chr6:31059000-31060400 Enhancers Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015