The 2.0 version of rSNPBase

Variant report

Variant rs2540978
Chromosome Location chr2:37461229-37461230
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37459800-37461600 Enhancers Primary T regulatory cells fromperipheralblood blood
2 chr2:37459800-37461600 Weak transcription Aorta Aorta
3 chr2:37459800-37465000 Weak transcription Fetal Muscle Trunk muscle
4 chr2:37460000-37463200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr2:37460000-37463400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr2:37460000-37468200 Weak transcription Psoas Muscle Psoas
7 chr2:37460000-37468600 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:37460000-37471200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr2:37460000-37474000 Weak transcription Colonic Mucosa Colon
10 chr2:37460000-37495600 Weak transcription Small Intestine intestine
11 chr2:37460000-37501600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:37460200-37461400 Enhancers Primary T helper cells PMA-I stimulated --
13 chr2:37460200-37461800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr2:37460200-37462000 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr2:37460200-37462600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr2:37460200-37463800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr2:37460200-37464600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr2:37460200-37464600 Weak transcription NHLF lung
19 chr2:37460200-37465200 Weak transcription Primary B cells from cord blood blood
20 chr2:37460200-37466600 Weak transcription Primary hematopoietic stem cells blood
21 chr2:37460200-37468400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:37460200-37468800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr2:37460200-37528600 Weak transcription Stomach Mucosa stomach
24 chr2:37460400-37461400 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr2:37460400-37461400 Weak transcription NHEK skin
26 chr2:37460400-37461600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr2:37460400-37461600 Weak transcription K562 blood
28 chr2:37460400-37461800 Weak transcription Fetal Muscle Leg muscle
29 chr2:37460400-37461800 Weak transcription Thymus Thymus
30 chr2:37460400-37462000 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr2:37460400-37462000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:37460400-37462000 Weak transcription Stomach Smooth Muscle stomach
33 chr2:37460400-37462000 Weak transcription GM12878-XiMat blood
34 chr2:37460400-37462200 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr2:37460400-37462200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr2:37460400-37462200 Weak transcription HSMMtube muscle
37 chr2:37460400-37462400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr2:37460400-37462400 Weak transcription HSMM muscle
39 chr2:37460400-37463200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr2:37460400-37463200 Weak transcription Primary monocytes fromperipheralblood blood
41 chr2:37460400-37463200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:37460400-37463200 Weak transcription Fetal Thymus thymus
43 chr2:37460400-37463200 Weak transcription A549 lung
44 chr2:37460400-37463400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr2:37460400-37463400 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr2:37460400-37463600 Weak transcription Colon Smooth Muscle Colon
47 chr2:37460400-37464000 Weak transcription Primary B cells from peripheral blood blood
48 chr2:37460400-37464000 Weak transcription Primary T cells from cord blood blood
49 chr2:37460400-37464000 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr2:37460400-37464400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015