Variant report

Variant rs2541953
Chromosome Location chr22:21381646-21381647
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:21370400-21382800 Weak transcription Brain Cingulate Gyrus brain
2 chr22:21370400-21383400 Weak transcription Brain Inferior Temporal Lobe brain
3 chr22:21370600-21382000 Weak transcription Psoas Muscle Psoas
4 chr22:21371000-21382200 Weak transcription Fetal Intestine Small intestine
5 chr22:21379200-21382400 Enhancers Fetal Thymus thymus
6 chr22:21379400-21382800 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr22:21379600-21382000 Enhancers Esophagus oesophagus
8 chr22:21379600-21382400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr22:21379600-21382600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr22:21379600-21383800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
11 chr22:21379800-21385200 Weak transcription Gastric stomach
12 chr22:21379800-21386000 Enhancers Placenta Placenta
13 chr22:21380400-21385800 Weak transcription Spleen Spleen
14 chr22:21380600-21383400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr22:21380600-21383400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr22:21380600-21383400 Weak transcription Right Atrium heart
17 chr22:21380600-21385200 Weak transcription Thymus Thymus
18 chr22:21380800-21382400 Enhancers NHEK skin
19 chr22:21380800-21382800 Enhancers HMEC breast
20 chr22:21380800-21383000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr22:21380800-21383800 Enhancers Fetal Muscle Leg muscle
22 chr22:21381000-21382200 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
23 chr22:21381000-21382400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr22:21381000-21382600 Enhancers HSMM muscle
25 chr22:21381000-21385400 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr22:21381200-21382000 Enhancers Fetal Muscle Trunk muscle
27 chr22:21381200-21382200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr22:21381200-21382200 Enhancers NHLF lung
29 chr22:21381200-21382600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr22:21381200-21385000 Weak transcription Fetal Intestine Large intestine
31 chr22:21381400-21381800 Enhancers Stomach Mucosa stomach
32 chr22:21381400-21381800 Bivalent Enhancer K562 blood
33 chr22:21381400-21382200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr22:21381400-21382200 Enhancers Muscle Satellite Cultured Cells --
35 chr22:21381400-21382200 Enhancers Brain Angular Gyrus brain
36 chr22:21381400-21382200 Enhancers Fetal Lung lung
37 chr22:21381400-21382200 Enhancers Ovary ovary
38 chr22:21381400-21382200 Enhancers NH-A brain
39 chr22:21381400-21382400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
40 chr22:21381400-21382400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr22:21381400-21382400 Enhancers HSMMtube muscle
42 chr22:21381400-21382600 Genic enhancers Skeletal Muscle Female skeletal muscle
43 chr22:21381600-21382000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr22:21381600-21382200 Enhancers Osteobl bone
45 chr22:21381600-21382400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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