Variant report

Variant rs2543290
Chromosome Location chr12:31257998-31257999
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:31227800-31266400 Weak transcription HSMMtube muscle
2 chr12:31228000-31258200 Weak transcription Primary hematopoietic stem cells blood
3 chr12:31228000-31269800 Weak transcription Rectal Smooth Muscle rectum
4 chr12:31228200-31261800 Weak transcription Brain Substantia Nigra brain
5 chr12:31228400-31259800 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr12:31230800-31258000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr12:31233400-31259000 Weak transcription NH-A brain
8 chr12:31233400-31259800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr12:31233800-31260800 Weak transcription Muscle Satellite Cultured Cells --
10 chr12:31238600-31261000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr12:31242600-31259000 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr12:31242600-31259200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:31242600-31259800 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr12:31242600-31270200 Weak transcription GM12878-XiMat blood
15 chr12:31242800-31260000 Weak transcription Left Ventricle heart
16 chr12:31242800-31270200 Weak transcription Primary B cells from cord blood blood
17 chr12:31243000-31259800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr12:31245200-31259000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr12:31245200-31262200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr12:31245600-31259000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr12:31249800-31258800 Weak transcription Fetal Lung lung
22 chr12:31249800-31260000 Weak transcription Brain Angular Gyrus brain
23 chr12:31249800-31269800 Weak transcription Primary T cells from cord blood blood
24 chr12:31250000-31258200 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr12:31250000-31260600 Weak transcription Placenta Amnion Placenta Amnion
26 chr12:31250400-31260000 Weak transcription Ovary ovary
27 chr12:31253000-31258000 Strong transcription Fetal Thymus thymus
28 chr12:31253000-31259400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr12:31253200-31258000 Strong transcription Dnd41 blood
30 chr12:31253200-31258200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr12:31253200-31259800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr12:31253400-31258000 Strong transcription iPS-20b Cell Line embryonic stem cell
33 chr12:31253400-31258200 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr12:31253600-31258200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr12:31253600-31259200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr12:31253600-31259600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr12:31253600-31259600 Strong transcription Fetal Brain Female brain
38 chr12:31253600-31259600 Strong transcription Fetal Stomach stomach
39 chr12:31253600-31259600 Strong transcription Thymus Thymus
40 chr12:31253800-31258000 Strong transcription Brain Hippocampus Middle brain
41 chr12:31254200-31258400 Weak transcription Aorta Aorta
42 chr12:31254600-31265800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr12:31255400-31258800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr12:31255600-31259000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr12:31255800-31258000 Weak transcription Brain Cingulate Gyrus brain
46 chr12:31255800-31258200 Weak transcription Primary B cells from peripheral blood blood
47 chr12:31255800-31258200 Weak transcription Adipose Nuclei Adipose
48 chr12:31255800-31258800 Weak transcription Primary monocytes fromperipheralblood blood
49 chr12:31255800-31259000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr12:31255800-31259600 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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