Variant report

Variant rs2546195
Chromosome Location chr5:95191713-95191714
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:95177800-95192200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr5:95179000-95206000 Weak transcription Spleen Spleen
3 chr5:95182800-95191800 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr5:95182800-95192200 Weak transcription Esophagus oesophagus
5 chr5:95185000-95192400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr5:95185000-95193000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr5:95185200-95192400 Weak transcription Muscle Satellite Cultured Cells --
8 chr5:95186400-95194200 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr5:95186600-95191800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr5:95186600-95192200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr5:95186600-95192200 Weak transcription Lung lung
12 chr5:95186600-95192200 Weak transcription Ovary ovary
13 chr5:95186600-95192800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr5:95186800-95192000 Active TSS Liver Liver
15 chr5:95186800-95192200 Weak transcription Adipose Nuclei Adipose
16 chr5:95186800-95192200 Weak transcription HepG2 liver
17 chr5:95188400-95195600 Enhancers Fetal Heart heart
18 chr5:95188600-95194400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr5:95188800-95192200 Weak transcription Pancreas Pancrea
20 chr5:95188800-95192800 Weak transcription Duodenum Mucosa Duodenum
21 chr5:95188800-95193000 Weak transcription Stomach Mucosa stomach
22 chr5:95189400-95192200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr5:95189400-95193400 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr5:95189600-95191800 Weak transcription Right Ventricle heart
25 chr5:95189600-95192200 Weak transcription Left Ventricle heart
26 chr5:95189800-95192200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr5:95190200-95192200 Weak transcription Right Atrium heart
28 chr5:95190600-95192000 Weak transcription Fetal Kidney kidney
29 chr5:95191000-95194200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr5:95191000-95194200 Enhancers Brain Hippocampus Middle brain
31 chr5:95191000-95194200 Enhancers Brain Inferior Temporal Lobe brain
32 chr5:95191000-95194200 Enhancers Brain Substantia Nigra brain
33 chr5:95191000-95194400 Enhancers Brain Angular Gyrus brain
34 chr5:95191200-95192400 Weak transcription Placenta Amnion Placenta Amnion
35 chr5:95191200-95193200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr5:95191200-95193400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr5:95191200-95194200 Enhancers Brain Anterior Caudate brain
38 chr5:95191200-95194200 Enhancers Brain Cingulate Gyrus brain
39 chr5:95191200-95194200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr5:95191400-95192200 Weak transcription Psoas Muscle Psoas
41 chr5:95191600-95192000 Weak transcription Placenta Placenta

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