Variant report

Variant rs2549291
Chromosome Location chr16:70149392-70149393
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:70147000-70149600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr16:70147200-70149400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr16:70147200-70149600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
4 chr16:70147400-70149400 Active TSS H1 Cell Line embryonic stem cell
5 chr16:70147400-70149400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
6 chr16:70147400-70149400 Active TSS iPS-15b Cell Line embryonic stem cell
7 chr16:70147400-70149400 Active TSS Brain Anterior Caudate brain
8 chr16:70147400-70149400 Active TSS Brain Germinal Matrix brain
9 chr16:70147400-70149600 Active TSS Colon Smooth Muscle Colon
10 chr16:70147600-70149400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
11 chr16:70147600-70149400 Active TSS Brain Angular Gyrus brain
12 chr16:70147600-70149400 Active TSS Brain Inferior Temporal Lobe brain
13 chr16:70147600-70149400 Active TSS Fetal Brain Female brain
14 chr16:70147600-70149400 Active TSS Rectal Smooth Muscle rectum
15 chr16:70147600-70149400 Active TSS HMEC breast
16 chr16:70147600-70149600 Active TSS iPS-18 Cell Line embryonic stem cell
17 chr16:70147600-70149600 Active TSS iPS-20b Cell Line embryonic stem cell
18 chr16:70147600-70149600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr16:70147600-70149600 Active TSS Primary T cells from cord blood blood
20 chr16:70147600-70149600 Active TSS Fetal Intestine Small intestine
21 chr16:70147600-70149600 Active TSS Rectal Mucosa Donor 31 rectum
22 chr16:70147600-70149600 Active TSS HSMM muscle
23 chr16:70147800-70149400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
24 chr16:70147800-70149400 Active TSS Primary hematopoietic stem cells short term culture blood
25 chr16:70147800-70149400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
26 chr16:70147800-70149400 Active TSS Duodenum Mucosa Duodenum
27 chr16:70147800-70149400 Active TSS GM12878-XiMat blood
28 chr16:70147800-70149600 Active TSS Esophagus oesophagus
29 chr16:70148800-70149400 Flanking Active TSS Primary T cells fromperipheralblood blood
30 chr16:70148800-70149400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
31 chr16:70148800-70149400 Flanking Active TSS Liver Liver
32 chr16:70148800-70149400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
33 chr16:70148800-70149600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr16:70148800-70149600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr16:70148800-70149600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
36 chr16:70148800-70157400 Weak transcription Placenta Amnion Placenta Amnion
37 chr16:70148800-70164200 Weak transcription Small Intestine intestine
38 chr16:70149000-70149400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr16:70149000-70149400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr16:70149000-70149400 Enhancers Primary neutrophils fromperipheralblood blood
41 chr16:70149000-70149400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr16:70149000-70149400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr16:70149000-70149400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
44 chr16:70149000-70149400 Enhancers Fetal Brain Male brain
45 chr16:70149000-70149400 Weak transcription Fetal Heart heart
46 chr16:70149000-70149400 Flanking Active TSS Fetal Stomach stomach
47 chr16:70149000-70149600 Enhancers Primary monocytes fromperipheralblood blood
48 chr16:70149000-70149600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr16:70149000-70149600 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr16:70149000-70149600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain

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