Variant report

Variant rs2550909
Chromosome Location chr16:75561709-75561710
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75551200-75566400 Weak transcription Brain Substantia Nigra brain
2 chr16:75551200-75589200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr16:75551400-75562800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr16:75551400-75562800 Weak transcription Small Intestine intestine
5 chr16:75551400-75572200 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr16:75551400-75584000 Weak transcription Right Atrium heart
7 chr16:75551600-75561800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr16:75551600-75562800 Weak transcription Brain Angular Gyrus brain
9 chr16:75551600-75563000 Weak transcription Ovary ovary
10 chr16:75551600-75568400 Weak transcription Rectal Smooth Muscle rectum
11 chr16:75551600-75575800 Weak transcription Brain Hippocampus Middle brain
12 chr16:75551800-75563000 Weak transcription Brain Germinal Matrix brain
13 chr16:75551800-75563000 Weak transcription Fetal Stomach stomach
14 chr16:75551800-75572400 Weak transcription Right Ventricle heart
15 chr16:75551800-75578000 Weak transcription Fetal Brain Female brain
16 chr16:75557800-75572400 Weak transcription Brain Cingulate Gyrus brain
17 chr16:75558600-75572000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr16:75560200-75562000 Weak transcription Duodenum Mucosa Duodenum
19 chr16:75560200-75563000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr16:75560200-75563000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr16:75560200-75563000 Weak transcription Brain Anterior Caudate brain
22 chr16:75560200-75563800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr16:75560200-75566400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr16:75560400-75562600 Weak transcription Brain Inferior Temporal Lobe brain
25 chr16:75560600-75562000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr16:75560600-75562000 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr16:75560600-75568600 Weak transcription Fetal Muscle Leg muscle
28 chr16:75561400-75562400 Enhancers Fetal Intestine Large intestine
29 chr16:75561400-75562600 Enhancers Stomach Mucosa stomach
30 chr16:75561400-75566000 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr16:75561400-75578000 Weak transcription Stomach Smooth Muscle stomach
32 chr16:75561600-75561800 Enhancers Colonic Mucosa Colon
33 chr16:75561600-75561800 Enhancers Gastric stomach
34 chr16:75561600-75562200 Enhancers Pancreas Pancrea
35 chr16:75561600-75562200 Enhancers HepG2 liver
36 chr16:75561600-75562400 Enhancers Fetal Intestine Small intestine
37 chr16:75561600-75563000 Enhancers Liver Liver
38 chr16:75561600-75569200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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