Variant report
| Variant | rs2554038 |
|---|---|
| Chromosome Location | chr15:57920224-57920225 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:57894400-57938200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 2 | chr15:57900600-57941600 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr15:57904400-57935200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 4 | chr15:57904600-57921600 | Weak transcription | Fetal Stomach | stomach |
| 5 | chr15:57904600-57936400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 6 | chr15:57905000-57940800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 7 | chr15:57912200-57924000 | Weak transcription | Esophagus | oesophagus |
| 8 | chr15:57912200-57939200 | Weak transcription | Placenta | Placenta |
| 9 | chr15:57912400-57921600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 10 | chr15:57912400-57923800 | Weak transcription | Lung | lung |
| 11 | chr15:57912800-57931600 | Weak transcription | Spleen | Spleen |
| 12 | chr15:57914800-57926600 | Weak transcription | Hela-S3 | cervix |
| 13 | chr15:57915600-57927400 | Strong transcription | Fetal Intestine Small | intestine |
| 14 | chr15:57916600-57927600 | Strong transcription | Fetal Intestine Large | intestine |
| 15 | chr15:57917600-57935400 | Weak transcription | Stomach Mucosa | stomach |
| 16 | chr15:57918200-57921600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 17 | chr15:57918400-57920400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 18 | chr15:57918400-57921600 | Weak transcription | Gastric | stomach |
| 19 | chr15:57918400-57921600 | Weak transcription | Pancreas | Pancrea |
| 20 | chr15:57918400-57921600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 21 | chr15:57918400-57927800 | Weak transcription | Colon Smooth Muscle | Colon |
| 22 | chr15:57918600-57921600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 23 | chr15:57918600-57924000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr15:57919400-57921600 | Weak transcription | Fetal Muscle Leg | muscle |
| 25 | chr15:57919400-57926200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 26 | chr15:57919400-57946800 | Weak transcription | Fetal Lung | lung |
| 27 | chr15:57919400-57959400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 28 | chr15:57919600-57925800 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 29 | chr15:57919800-57921600 | Strong transcription | Left Ventricle | heart |
| 30 | chr15:57919800-57922200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 31 | chr15:57919800-57926200 | Weak transcription | Right Atrium | heart |
| 32 | chr15:57919800-57926200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 33 | chr15:57919800-57927000 | Strong transcription | Stomach Smooth Muscle | stomach |
| 34 | chr15:57919800-57927200 | Weak transcription | Ovary | ovary |
| 35 | chr15:57920000-57920600 | Strong transcription | Right Ventricle | heart |
| 36 | chr15:57920000-57924400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 37 | chr15:57920000-57924800 | Weak transcription | HUVEC | blood vessel |
| 38 | chr15:57920000-57931600 | Weak transcription | Aorta | Aorta |
| 39 | chr15:57920200-57921000 | Strong transcription | Fetal Heart | heart |
| 40 | chr15:57920200-57923200 | Strong transcription | Adipose Nuclei | Adipose |
| 41 | chr15:57920200-57926200 | Weak transcription | Psoas Muscle | Psoas |
