The 2.0 version of rSNPBase

Variant report

Variant rs2577165
Chromosome Location chr1:220216950-220216951
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220170400-220218600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:220172600-220218600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:220178000-220217800 Weak transcription Pancreas Pancrea
4 chr1:220178200-220218600 Weak transcription Right Ventricle heart
5 chr1:220193600-220218600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:220196400-220218200 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:220197200-220217800 Weak transcription Colonic Mucosa Colon
8 chr1:220203400-220218600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:220205200-220218200 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:220206600-220217000 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:220206800-220218200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr1:220206800-220219000 Weak transcription Fetal Lung lung
13 chr1:220207600-220217000 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr1:220207600-220218200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:220208200-220218200 Weak transcription Brain Substantia Nigra brain
16 chr1:220208400-220218200 Weak transcription Colon Smooth Muscle Colon
17 chr1:220208600-220218000 Weak transcription HSMM muscle
18 chr1:220208800-220218400 Weak transcription Primary hematopoietic stem cells blood
19 chr1:220210600-220218600 Weak transcription Right Atrium heart
20 chr1:220212400-220217200 Weak transcription Gastric stomach
21 chr1:220212400-220218200 Weak transcription Stomach Mucosa stomach
22 chr1:220212800-220217200 Weak transcription Small Intestine intestine
23 chr1:220212800-220218200 Weak transcription HMEC breast
24 chr1:220213400-220217000 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:220213400-220217000 Weak transcription Brain Germinal Matrix brain
26 chr1:220213400-220217000 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:220213400-220217600 Weak transcription Lung lung
28 chr1:220213400-220217800 Weak transcription Aorta Aorta
29 chr1:220213400-220218000 Weak transcription Osteobl bone
30 chr1:220213400-220218400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:220213400-220218600 Weak transcription Left Ventricle heart
32 chr1:220213400-220218600 Weak transcription Psoas Muscle Psoas
33 chr1:220213400-220218600 Weak transcription Thymus Thymus
34 chr1:220213400-220219000 Weak transcription Ovary ovary
35 chr1:220213400-220219200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:220213400-220219400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:220213400-220219400 Weak transcription Spleen Spleen
38 chr1:220213600-220217000 Weak transcription HUVEC blood vessel
39 chr1:220213600-220218200 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:220213600-220218200 Weak transcription Adipose Nuclei Adipose
41 chr1:220213600-220218200 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:220213600-220218200 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:220213600-220218200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:220213600-220218400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:220213600-220218600 Weak transcription H1 Cell Line embryonic stem cell
46 chr1:220213600-220218600 Weak transcription Fetal Kidney kidney
47 chr1:220213600-220218600 Weak transcription HSMMtube muscle
48 chr1:220213600-220219000 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:220213800-220217000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:220213800-220217000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015