Variant report
| Variant | rs2581827 |
|---|---|
| Chromosome Location | chr3:52966558-52966559 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:52932000-52970000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 2 | chr3:52932000-52978000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr3:52932200-52967800 | Weak transcription | HSMM | muscle |
| 4 | chr3:52932200-52968600 | Weak transcription | Osteobl | bone |
| 5 | chr3:52932200-52968800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 6 | chr3:52932200-52968800 | Weak transcription | Fetal Brain Male | brain |
| 7 | chr3:52932400-52968600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 8 | chr3:52932400-52968600 | Weak transcription | NHDF-Ad | bronchial |
| 9 | chr3:52932400-52968800 | Weak transcription | NHEK | skin |
| 10 | chr3:52935600-52968600 | Strong transcription | Dnd41 | blood |
| 11 | chr3:52941800-52980200 | Weak transcription | Psoas Muscle | Psoas |
| 12 | chr3:52947400-52968000 | Weak transcription | Fetal Lung | lung |
| 13 | chr3:52949000-52968800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 14 | chr3:52950000-52966600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 15 | chr3:52952000-52968600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 16 | chr3:52954000-53012200 | Weak transcription | Esophagus | oesophagus |
| 17 | chr3:52954200-53012200 | Weak transcription | Pancreas | Pancrea |
| 18 | chr3:52954400-52968600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 19 | chr3:52954600-52967000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 20 | chr3:52954800-52968400 | Weak transcription | Brain Substantia Nigra | brain |
| 21 | chr3:52954800-52976800 | Weak transcription | Brain Germinal Matrix | brain |
| 22 | chr3:52955200-52968600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 23 | chr3:52955200-52968600 | Weak transcription | Colon Smooth Muscle | Colon |
| 24 | chr3:52955200-52986400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 25 | chr3:52955800-52968800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 26 | chr3:52956000-52968600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 27 | chr3:52956000-52973800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 28 | chr3:52956200-52968400 | Weak transcription | Brain Hippocampus Middle | brain |
| 29 | chr3:52956400-52967600 | Weak transcription | Fetal Brain Female | brain |
| 30 | chr3:52956400-52986400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 31 | chr3:52957000-52967600 | Weak transcription | Aorta | Aorta |
| 32 | chr3:52957200-52966600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 33 | chr3:52957200-52974800 | Weak transcription | Primary T cells from cord blood | blood |
| 34 | chr3:52958200-52985800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 35 | chr3:52960200-52979600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 36 | chr3:52961400-52968800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 37 | chr3:52961600-52987000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 38 | chr3:52962400-52967200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 39 | chr3:52962400-52967400 | Weak transcription | Right Ventricle | heart |
| 40 | chr3:52962400-52968400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 41 | chr3:52962400-52968600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 42 | chr3:52962400-52968600 | Weak transcription | A549 | lung |
| 43 | chr3:52962400-52969800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 44 | chr3:52962400-52969800 | Weak transcription | HMEC | breast |
| 45 | chr3:52962400-52970000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 46 | chr3:52962400-52975800 | Weak transcription | HepG2 | liver |
| 47 | chr3:52962400-52986600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 48 | chr3:52962400-52998200 | Weak transcription | Lung | lung |
| 49 | chr3:52962400-53001600 | Weak transcription | Brain Angular Gyrus | brain |
| 50 | chr3:52962400-53007000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
