Variant report

Variant	rs2589584
Chromosome Location	chr1:220727979-220727980
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1193030	0.93[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1933003	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2786605	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6694462	1.00[AMR][1000 genomes]
rs6699853	1.00[AMR][1000 genomes]
rs74141905	1.00[AMR][1000 genomes]
rs7531636	1.00[AMR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220718000-220738600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr1:220718600-220731200	Weak transcription	Esophagus	oesophagus
3	chr1:220718600-220738600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr1:220718600-220739000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr1:220722600-220738800	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr1:220723200-220738600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr1:220724400-220743400	Weak transcription	Fetal Brain Male	brain
8	chr1:220724600-220729000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr1:220724600-220729200	Weak transcription	Adipose Nuclei	Adipose
10	chr1:220724600-220737600	Weak transcription	Fetal Brain Female	brain
11	chr1:220724600-220741600	Weak transcription	Aorta	Aorta
12	chr1:220724800-220728800	Weak transcription	Fetal Muscle Leg	muscle
13	chr1:220724800-220738800	Weak transcription	Right Atrium	heart
14	chr1:220725200-220728000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr1:220726000-220732600	Weak transcription	Pancreatic Islets	Pancreatic Islet
16	chr1:220726200-220728000	Enhancers	Left Ventricle	heart
17	chr1:220726800-220729000	Strong transcription	Cortex derived primary cultured neurospheres	brain
18	chr1:220726800-220729000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr1:220726800-220729400	Weak transcription	HMEC	breast
20	chr1:220727200-220729400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr1:220727400-220728800	Weak transcription	NHEK	skin
22	chr1:220727400-220736400	Weak transcription	Brain Germinal Matrix	brain
23	chr1:220727400-220738800	Weak transcription	Fetal Muscle Trunk	muscle
24	chr1:220727800-220728800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr1:220727800-220738800	Weak transcription	Fetal Heart	heart

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