Variant report

Variant rs2590109
Chromosome Location chr1:145000257-145000258
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144991400-145004200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr1:144991600-145002000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr1:144992000-145002400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr1:144992600-145007800 Weak transcription HMEC breast
5 chr1:144993800-145002400 Strong transcription Osteobl bone
6 chr1:144995000-145005600 Weak transcription NH-A brain
7 chr1:144995800-145004800 Weak transcription Fetal Intestine Small intestine
8 chr1:144995800-145008600 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:144996600-145008600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:144997000-145000400 Strong transcription Muscle Satellite Cultured Cells --
11 chr1:144997200-145000600 Strong transcription NHDF-Ad bronchial
12 chr1:144997400-145000800 Enhancers Primary T helper cells PMA-I stimulated --
13 chr1:144997400-145001000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:144997400-145001000 Enhancers Primary T helper cells fromperipheralblood blood
15 chr1:144997400-145001600 Enhancers Primary monocytes fromperipheralblood blood
16 chr1:144997400-145002800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:144997400-145007800 Weak transcription NHEK skin
18 chr1:144997600-145000800 Enhancers ES-I3 Cell Line embryonic stem cell
19 chr1:144997600-145000800 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr1:144997600-145001000 Genic enhancers Brain Angular Gyrus brain
21 chr1:144997600-145001000 Genic enhancers Brain Cingulate Gyrus brain
22 chr1:144997600-145001000 Genic enhancers Brain Inferior Temporal Lobe brain
23 chr1:144997600-145001000 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
24 chr1:144997600-145001000 Genic enhancers Brain Substantia Nigra brain
25 chr1:144997600-145001200 Enhancers H9 Cell Line embryonic stem cell
26 chr1:144997600-145001400 Enhancers Primary T cells from cord blood blood
27 chr1:144997800-145000800 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr1:144997800-145001000 Enhancers HUES6 Cell Line embryonic stem cell
29 chr1:144997800-145001200 Enhancers H1 Cell Line embryonic stem cell
30 chr1:144998000-145000800 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr1:144998000-145001000 Enhancers ES-WA7 Cell Line embryonic stem cell
32 chr1:144998000-145001000 Strong transcription Stomach Smooth Muscle stomach
33 chr1:144998000-145009000 Weak transcription Stomach Mucosa stomach
34 chr1:144998200-145002000 Weak transcription Fetal Brain Male brain
35 chr1:144998600-145001000 Enhancers HUES48 Cell Line embryonic stem cell
36 chr1:144998600-145001000 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr1:144998600-145001000 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr1:144998600-145001000 Enhancers Primary hematopoietic stem cells blood
39 chr1:144998600-145001000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:144998600-145001000 Enhancers Small Intestine intestine
41 chr1:144998600-145001400 Enhancers Primary B cells from peripheral blood blood
42 chr1:144998600-145002800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:144998600-145003000 Genic enhancers NHLF lung
44 chr1:144998800-145000400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
45 chr1:144998800-145000400 Enhancers Primary T cells fromperipheralblood blood
46 chr1:144998800-145000400 Enhancers Primary Natural Killer cells fromperipheralblood blood
47 chr1:144998800-145000400 Genic enhancers Placenta Placenta
48 chr1:144998800-145000600 Genic enhancers Fetal Muscle Leg muscle
49 chr1:144998800-145001000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr1:144998800-145001000 Enhancers Primary neutrophils fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links