Variant report

Variant rs2596561
Chromosome Location chr6:31354820-31354821
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31345000-31361600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:31345800-31367400 Weak transcription Gastric stomach
3 chr6:31348800-31364400 Weak transcription Primary T cells from cord blood blood
4 chr6:31350200-31367400 Weak transcription Aorta Aorta
5 chr6:31350600-31361600 Weak transcription Ovary ovary
6 chr6:31351000-31366000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr6:31351200-31364000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr6:31351400-31355800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr6:31352000-31367400 Weak transcription Pancreas Pancrea
10 chr6:31352600-31361400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr6:31352800-31363600 Weak transcription Left Ventricle heart
12 chr6:31353600-31366600 Weak transcription Rectal Smooth Muscle rectum
13 chr6:31354200-31355000 Enhancers Lung lung
14 chr6:31354200-31355800 Enhancers Liver Liver
15 chr6:31354200-31356200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:31354200-31361400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr6:31354200-31364600 Weak transcription Colon Smooth Muscle Colon
18 chr6:31354400-31355000 Enhancers H1 Cell Line embryonic stem cell
19 chr6:31354400-31355600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr6:31354400-31361400 Weak transcription Adipose Nuclei Adipose
21 chr6:31354400-31363800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:31354400-31364400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr6:31354400-31364600 Weak transcription Stomach Smooth Muscle stomach
24 chr6:31354600-31355000 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr6:31354800-31355000 Enhancers H9 Cell Line embryonic stem cell
26 chr6:31354800-31355000 Enhancers HUES6 Cell Line embryonic stem cell
27 chr6:31354800-31355400 Enhancers HepG2 liver
28 chr6:31354800-31365000 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr6:31354800-31366800 Weak transcription HSMM muscle

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