Variant report

Variant	rs2605352
Chromosome Location	chr12:75015251-75015252
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1157081	0.82[AFR][1000 genomes]
rs1493813	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs1994886	0.85[AFR][1000 genomes]
rs2131714	0.86[AFR][1000 genomes]
rs2131715	0.86[AFR][1000 genomes]
rs2131716	0.86[AFR][1000 genomes]
rs2605353	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs2605354	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs2605356	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs2605357	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs2605359	0.81[AMR][1000 genomes]
rs2641455	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs2661709	0.86[AFR][1000 genomes]
rs2661716	0.85[AFR][1000 genomes]
rs903167	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs903168	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs996431	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:75013200-75015400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr12:75014800-75015400	Enhancers	Brain Hippocampus Middle	brain
3	chr12:75015000-75015400	Enhancers	Brain Anterior Caudate	brain
4	chr12:75015000-75017800	Weak transcription	Stomach Mucosa	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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