Variant report

Variant	rs2631786
Chromosome Location	chr1:76690876-76690877
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs2631787	1.00[AFR][1000 genomes]
rs2631789	0.85[AFR][1000 genomes]
rs2631790	0.85[AFR][1000 genomes]
rs2706181	1.00[AFR][1000 genomes]
rs2706203	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870621	chr1:76620313-76997071	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:76686800-76692200	Weak transcription	Fetal Thymus	thymus
2	chr1:76687400-76695000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:76689000-76693800	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr1:76689800-76692400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr1:76690000-76694800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr1:76690600-76692400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr1:76690800-76692200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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