Variant report

Variant rs2641725
Chromosome Location chr3:195475020-195475021
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195448200-195483800 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:195462200-195475400 Weak transcription Stomach Smooth Muscle stomach
3 chr3:195463000-195475600 Weak transcription Brain Anterior Caudate brain
4 chr3:195464600-195484000 Weak transcription Right Atrium heart
5 chr3:195465000-195475400 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr3:195472000-195475200 Strong transcription Fetal Intestine Small intestine
7 chr3:195472200-195484000 Weak transcription Brain Angular Gyrus brain
8 chr3:195474200-195476000 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr3:195474400-195475400 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr3:195474400-195477800 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr3:195474600-195475400 Enhancers Primary B cells from peripheral blood blood
12 chr3:195474600-195475600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr3:195474600-195475600 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr3:195474600-195475800 Enhancers Primary T helper 17 cells PMA-I stimulated --
15 chr3:195474600-195478200 Weak transcription Fetal Intestine Large intestine
16 chr3:195474800-195475200 Bivalent Enhancer Fetal Muscle Trunk muscle
17 chr3:195474800-195475800 Enhancers Pancreas Pancrea
18 chr3:195475000-195475200 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
19 chr3:195475000-195475200 Bivalent Enhancer H1 Cell Line embryonic stem cell
20 chr3:195475000-195475200 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr3:195475000-195475200 Flanking Bivalent TSS/Enh H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr3:195475000-195475200 Flanking Bivalent TSS/Enh IMR90 fetal lung fibroblasts Cell Line lung
23 chr3:195475000-195475200 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
24 chr3:195475000-195475200 Enhancers Primary T cells from cord blood blood
25 chr3:195475000-195475200 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
26 chr3:195475000-195475200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
27 chr3:195475000-195475200 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr3:195475000-195475200 Bivalent Enhancer Muscle Satellite Cultured Cells --
29 chr3:195475000-195475200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
30 chr3:195475000-195475200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
31 chr3:195475000-195475200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr3:195475000-195475200 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
33 chr3:195475000-195475200 Enhancers Liver Liver
34 chr3:195475000-195475200 Enhancers Brain Cingulate Gyrus brain
35 chr3:195475000-195475200 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
36 chr3:195475000-195475200 Enhancers Brain Inferior Temporal Lobe brain
37 chr3:195475000-195475200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
38 chr3:195475000-195475200 Enhancers Brain Substantia Nigra brain
39 chr3:195475000-195475200 Flanking Active TSS Duodenum Mucosa Duodenum
40 chr3:195475000-195475200 Flanking Active TSS Esophagus oesophagus
41 chr3:195475000-195475200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
42 chr3:195475000-195475200 Enhancers Fetal Heart heart
43 chr3:195475000-195475200 Bivalent Enhancer Fetal Muscle Leg muscle
44 chr3:195475000-195475200 Bivalent Enhancer Fetal Stomach stomach
45 chr3:195475000-195475200 Enhancers Ovary ovary
46 chr3:195475000-195475200 Genic enhancers Rectal Mucosa Donor 29 rectum
47 chr3:195475000-195475200 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
48 chr3:195475000-195475200 Enhancers Skeletal Muscle Male skeletal muscle
49 chr3:195475000-195475200 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
50 chr3:195475000-195475200 Bivalent Enhancer Stomach Mucosa stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links