The 2.0 version of rSNPBase

Variant report

Variant rs2643718
Chromosome Location chr15:45794662-45794663
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45751200-45801600 Weak transcription Rectal Smooth Muscle rectum
2 chr15:45754200-45801600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr15:45757000-45801800 Weak transcription Gastric stomach
4 chr15:45767200-45813600 Weak transcription Psoas Muscle Psoas
5 chr15:45769200-45812000 Weak transcription Small Intestine intestine
6 chr15:45769400-45794800 Weak transcription Ovary ovary
7 chr15:45769400-45813000 Weak transcription Fetal Intestine Large intestine
8 chr15:45771000-45813400 Weak transcription Right Ventricle heart
9 chr15:45771200-45814000 Weak transcription Placenta Placenta
10 chr15:45772000-45801600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr15:45773200-45814000 Weak transcription Pancreas Pancrea
12 chr15:45774600-45812800 Weak transcription Fetal Brain Male brain
13 chr15:45775600-45812800 Weak transcription Primary T cells fromperipheralblood blood
14 chr15:45776000-45800400 Weak transcription Esophagus oesophagus
15 chr15:45778000-45813000 Weak transcription Brain Germinal Matrix brain
16 chr15:45778400-45801800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr15:45778400-45812600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr15:45778800-45806400 Weak transcription Spleen Spleen
19 chr15:45779400-45812800 Weak transcription Fetal Brain Female brain
20 chr15:45779800-45799800 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr15:45779800-45800200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr15:45780000-45800000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr15:45780000-45800000 Weak transcription Liver Liver
24 chr15:45780400-45800200 Weak transcription Colon Smooth Muscle Colon
25 chr15:45781200-45800200 Weak transcription Brain Substantia Nigra brain
26 chr15:45781200-45801800 Weak transcription Aorta Aorta
27 chr15:45781600-45797800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr15:45781800-45798400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr15:45781800-45800000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr15:45781800-45800000 Weak transcription Primary B cells from peripheral blood blood
31 chr15:45781800-45800000 Weak transcription Fetal Lung lung
32 chr15:45781800-45800400 Weak transcription Fetal Muscle Trunk muscle
33 chr15:45781800-45801400 Weak transcription Primary T cells from cord blood blood
34 chr15:45781800-45801800 Weak transcription Lung lung
35 chr15:45781800-45802400 Weak transcription Primary B cells from cord blood blood
36 chr15:45782000-45797000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr15:45782000-45800200 Weak transcription Left Ventricle heart
38 chr15:45782600-45800000 Weak transcription Stomach Smooth Muscle stomach
39 chr15:45783800-45800000 Weak transcription Adipose Nuclei Adipose
40 chr15:45783800-45812800 Weak transcription Fetal Kidney kidney
41 chr15:45784000-45800000 Weak transcription Duodenum Mucosa Duodenum
42 chr15:45788000-45812800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr15:45788200-45798600 Weak transcription Brain Anterior Caudate brain
44 chr15:45788200-45801800 Weak transcription Brain Inferior Temporal Lobe brain
45 chr15:45788200-45810800 Weak transcription Brain Cingulate Gyrus brain
46 chr15:45788600-45812800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr15:45790800-45813000 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr15:45792200-45808400 Weak transcription Placenta Amnion Placenta Amnion
49 chr15:45792200-45813600 Weak transcription HUVEC blood vessel
50 chr15:45792200-45813600 Weak transcription NH-A brain

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Last update: Aug 31, 2015