The 2.0 version of rSNPBase

Variant report

Variant rs2686320
Chromosome Location chr3:20113373-20113374
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:20099000-20122600 Weak transcription Aorta Aorta
2 chr3:20099400-20122600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr3:20099400-20122800 Weak transcription Lung lung
4 chr3:20102800-20113400 Weak transcription Stomach Smooth Muscle stomach
5 chr3:20102800-20136800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr3:20103200-20114000 Weak transcription Liver Liver
7 chr3:20103200-20119400 Weak transcription Fetal Intestine Small intestine
8 chr3:20103200-20122200 Weak transcription Duodenum Mucosa Duodenum
9 chr3:20104400-20113400 Enhancers Brain Hippocampus Middle brain
10 chr3:20106400-20122600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr3:20106800-20130800 Weak transcription Fetal Intestine Large intestine
12 chr3:20107000-20116800 Weak transcription Small Intestine intestine
13 chr3:20107000-20117000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr3:20107000-20122600 Weak transcription Gastric stomach
15 chr3:20107000-20122600 Weak transcription Pancreas Pancrea
16 chr3:20107000-20122600 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr3:20107200-20122400 Weak transcription Placenta Amnion Placenta Amnion
18 chr3:20107800-20122600 Weak transcription Spleen Spleen
19 chr3:20107800-20122800 Weak transcription Esophagus oesophagus
20 chr3:20108200-20127600 Weak transcription Ovary ovary
21 chr3:20109000-20113400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:20109000-20113600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr3:20109000-20115200 Weak transcription Hela-S3 cervix
24 chr3:20109000-20121200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr3:20109200-20113600 Weak transcription Fetal Lung lung
26 chr3:20109200-20115200 Weak transcription Muscle Satellite Cultured Cells --
27 chr3:20109200-20115200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:20109200-20122400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr3:20109600-20113400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
30 chr3:20109600-20116800 Weak transcription Fetal Muscle Trunk muscle
31 chr3:20110000-20124800 Weak transcription Placenta Placenta
32 chr3:20110200-20122400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:20110600-20115800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr3:20110600-20117800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr3:20110800-20113400 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr3:20110800-20113400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr3:20110800-20114000 Weak transcription HMEC breast
38 chr3:20110800-20114200 Weak transcription K562 blood
39 chr3:20110800-20121200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr3:20110800-20121200 Weak transcription Colon Smooth Muscle Colon
41 chr3:20110800-20122000 Weak transcription Stomach Mucosa stomach
42 chr3:20111000-20113600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr3:20111000-20115800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr3:20111000-20116200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr3:20111000-20122600 Weak transcription Rectal Smooth Muscle rectum
46 chr3:20111400-20113600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
47 chr3:20111400-20115000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr3:20111400-20115000 Enhancers Psoas Muscle Psoas
49 chr3:20111600-20114000 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr3:20111600-20121600 Weak transcription Primary T killer naive cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015