Variant report

Variant rs2688021
Chromosome Location chr17:16723542-16723543
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16719000-16724000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr17:16719200-16723600 Weak transcription NHEK skin
3 chr17:16721400-16724600 Enhancers Adipose Nuclei Adipose
4 chr17:16721600-16723800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr17:16722000-16724800 Enhancers Right Ventricle heart
6 chr17:16722200-16724200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr17:16722600-16724400 Enhancers Rectal Smooth Muscle rectum
8 chr17:16722600-16724600 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr17:16722600-16724800 Enhancers Left Ventricle heart
10 chr17:16722800-16723800 Enhancers HMEC breast
11 chr17:16722800-16724000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr17:16722800-16725200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr17:16722800-16725200 Enhancers Esophagus oesophagus
14 chr17:16723000-16723600 Weak transcription Placenta Amnion Placenta Amnion
15 chr17:16723000-16724800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr17:16723000-16724800 Enhancers Fetal Heart heart
17 chr17:16723000-16725200 Enhancers Fetal Muscle Leg muscle
18 chr17:16723200-16723800 Enhancers Rectal Mucosa Donor 29 rectum
19 chr17:16723200-16724200 Enhancers Rectal Mucosa Donor 31 rectum
20 chr17:16723200-16724200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
21 chr17:16723200-16724400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr17:16723200-16724400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr17:16723200-16724400 Enhancers Brain Hippocampus Middle brain
24 chr17:16723200-16724400 Enhancers Right Atrium heart
25 chr17:16723200-16724600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr17:16723200-16724600 Enhancers Colon Smooth Muscle Colon
27 chr17:16723200-16724600 Enhancers Psoas Muscle Psoas
28 chr17:16723200-16725200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
29 chr17:16723400-16723600 Flanking Active TSS Stomach Smooth Muscle stomach
30 chr17:16723400-16723800 Enhancers Duodenum Smooth Muscle Duodenum
31 chr17:16723400-16724200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr17:16723400-16724200 Enhancers Colonic Mucosa Colon
33 chr17:16723400-16724200 Enhancers Duodenum Mucosa Duodenum
34 chr17:16723400-16724200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
35 chr17:16723400-16724400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr17:16723400-16724400 Enhancers HSMMtube muscle
37 chr17:16723400-16724600 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links