Variant report

Variant rs2688496
Chromosome Location chr3:195530971-195530972
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195505600-195532200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr3:195527800-195535800 Enhancers Fetal Thymus thymus
3 chr3:195528400-195531200 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr3:195528400-195531200 Enhancers Pancreas Pancrea
5 chr3:195528400-195532400 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr3:195528400-195535200 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr3:195528400-195537200 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr3:195528600-195531200 Enhancers Primary T helper cells PMA-I stimulated --
9 chr3:195528600-195532400 Bivalent Enhancer Primary T cells fromperipheralblood blood
10 chr3:195528600-195532600 Enhancers Primary T helper cells fromperipheralblood blood
11 chr3:195528600-195534000 Enhancers Primary hematopoietic stem cells blood
12 chr3:195528800-195531200 Bivalent Enhancer Stomach Mucosa stomach
13 chr3:195528800-195531800 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr3:195528800-195532000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr3:195528800-195532400 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr3:195529000-195532200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr3:195529000-195536000 Weak transcription Placenta Amnion Placenta Amnion
18 chr3:195529400-195531200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr3:195529400-195533600 Weak transcription H9 Cell Line embryonic stem cell
20 chr3:195529600-195531000 Weak transcription H1 Cell Line embryonic stem cell
21 chr3:195529600-195531000 Weak transcription Left Ventricle heart
22 chr3:195529600-195531000 Weak transcription Small Intestine intestine
23 chr3:195529600-195532200 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr3:195529600-195532200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr3:195529600-195532200 Weak transcription Lung lung
26 chr3:195529600-195533000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr3:195529600-195533400 Enhancers Placenta Placenta
28 chr3:195529600-195533600 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr3:195529600-195534600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr3:195529800-195531000 Weak transcription Psoas Muscle Psoas
31 chr3:195529800-195534800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr3:195530000-195531200 Enhancers Primary T cells from cord blood blood
33 chr3:195530000-195531400 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr3:195530000-195531800 Enhancers Primary B cells from cord blood blood
35 chr3:195530000-195532000 Enhancers Thymus Thymus
36 chr3:195530000-195532400 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr3:195530000-195533200 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr3:195530000-195533200 Enhancers Skeletal Muscle Female skeletal muscle
39 chr3:195530000-195534400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr3:195530000-195534800 Weak transcription HSMMtube muscle
41 chr3:195530200-195531000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr3:195530200-195531000 Enhancers Colonic Mucosa Colon
43 chr3:195530200-195532400 Enhancers Primary B cells from peripheral blood blood
44 chr3:195530200-195533000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr3:195530200-195541400 Weak transcription Right Atrium heart
46 chr3:195530400-195531000 Genic enhancers Rectal Mucosa Donor 29 rectum
47 chr3:195530400-195531400 Enhancers Ovary ovary
48 chr3:195530400-195531800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr3:195530400-195531800 Enhancers Fetal Intestine Small intestine
50 chr3:195530400-195532400 Enhancers Primary Natural Killer cells fromperipheralblood blood

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