The 2.0 version of rSNPBase

Variant report

Variant rs2691557
Chromosome Location chr7:17942597-17942598
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:17900400-17956600 Weak transcription A549 lung
2 chr7:17901400-17946200 Weak transcription NHLF lung
3 chr7:17903600-17945400 Weak transcription Aorta Aorta
4 chr7:17903600-17953000 Weak transcription Thymus Thymus
5 chr7:17903800-17949000 Weak transcription NHEK skin
6 chr7:17907200-17954800 Weak transcription Spleen Spleen
7 chr7:17911400-17977400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr7:17913000-17955800 Weak transcription K562 blood
9 chr7:17916200-17942600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr7:17918200-17948000 Weak transcription GM12878-XiMat blood
11 chr7:17918800-17942600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr7:17927200-17944600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr7:17927200-17955000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr7:17928200-17946800 Weak transcription Hela-S3 cervix
15 chr7:17929200-17951400 Weak transcription Fetal Intestine Large intestine
16 chr7:17929200-17952200 Weak transcription Fetal Muscle Leg muscle
17 chr7:17929400-17943000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr7:17929800-17943400 Weak transcription Primary T cells from cord blood blood
19 chr7:17929800-17944200 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr7:17929800-17946600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr7:17929800-17948000 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr7:17929800-17949200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr7:17929800-17951600 Weak transcription Fetal Thymus thymus
24 chr7:17929800-17954000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr7:17930000-17943000 Weak transcription Duodenum Mucosa Duodenum
26 chr7:17930000-17948200 Weak transcription Muscle Satellite Cultured Cells --
27 chr7:17930000-17949200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr7:17930000-17950200 Weak transcription Primary hematopoietic stem cells blood
29 chr7:17930000-17950200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr7:17930000-17952400 Weak transcription Primary B cells from peripheral blood blood
31 chr7:17930200-17942600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr7:17930200-17946800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr7:17930200-17950200 Weak transcription NHDF-Ad bronchial
34 chr7:17930200-17951800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr7:17930200-17954200 Weak transcription Placenta Placenta
36 chr7:17930400-17943000 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr7:17931400-17943200 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr7:17931600-17943000 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr7:17932200-17946200 Weak transcription Primary monocytes fromperipheralblood blood
40 chr7:17934800-17949400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr7:17936400-17947400 Weak transcription Primary B cells from cord blood blood
42 chr7:17938200-17944000 Weak transcription Brain Anterior Caudate brain
43 chr7:17938200-17951800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr7:17938400-17943200 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr7:17938800-17952800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr7:17940200-17950800 Weak transcription Fetal Stomach stomach
47 chr7:17940400-17947200 Weak transcription Psoas Muscle Psoas
48 chr7:17941000-17943400 Enhancers HUES48 Cell Line embryonic stem cell
49 chr7:17941000-17943800 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr7:17941000-17951600 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015