Variant report

Variant	rs2695760
Chromosome Location	chr2:178835711-178835712
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:178834171..178836909-chr2:178857022..178858774,2	K562	blood:
2	chr2:178825449..178829644-chr2:178831703..178836480,4	K562	blood:
3	chr2:178823421..178826085-chr2:178834912..178837926,3	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11695211	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs12463866	0.80[ASN][1000 genomes]
rs12469439	0.89[ASN][1000 genomes]
rs12615720	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1369519	0.85[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs1369520	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1405645	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1405646	0.89[ASN][1000 genomes]
rs1821628	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2217839	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2573080	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2573081	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2573085	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2573088	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2695103	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2695104	0.90[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs2695111	0.82[ASN][1000 genomes]
rs2695112	0.82[ASN][1000 genomes]
rs2695729	0.90[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs2695738	0.82[ASN][1000 genomes]
rs2695754	0.82[ASN][1000 genomes]
rs3108476	0.80[ASN][1000 genomes]
rs6433705	0.85[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs6745288	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533377	chr2:178718801-178963463	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1007579	chr2:178729330-178890946	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv875451	chr2:178748294-178953409	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv998304	chr2:178756380-178924378	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv536056	chr2:178756380-178924378	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:178834600-178837600	Enhancers	HepG2	liver
2	chr2:178835200-178836200	Enhancers	Pancreas	Pancrea
3	chr2:178835400-178835800	Enhancers	Fetal Intestine Small	intestine
4	chr2:178835400-178836200	Enhancers	Liver	Liver
5	chr2:178835600-178836800	Enhancers	Stomach Mucosa	stomach

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