The 2.0 version of rSNPBase

Variant report

Variant rs2698807
Chromosome Location chr19:44788296-44788297
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44775000-44791200 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:44777000-44807000 ZNF genes & repeats Liver Liver
3 chr19:44778800-44791000 Weak transcription Fetal Heart heart
4 chr19:44778800-44791000 Weak transcription HSMMtube muscle
5 chr19:44778800-44791400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr19:44779200-44789200 Weak transcription Brain Angular Gyrus brain
7 chr19:44779400-44791000 Weak transcription Dnd41 blood
8 chr19:44781800-44801400 ZNF genes & repeats Adipose Nuclei Adipose
9 chr19:44782800-44791400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr19:44782800-44792000 Weak transcription Muscle Satellite Cultured Cells --
11 chr19:44783200-44791400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr19:44783200-44804400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr19:44785200-44791400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr19:44785200-44801600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
15 chr19:44785600-44791200 Weak transcription Right Ventricle heart
16 chr19:44786000-44791200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr19:44786800-44788400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
18 chr19:44787000-44789000 ZNF genes & repeats Aorta Aorta
19 chr19:44787000-44789000 Weak transcription Brain Anterior Caudate brain
20 chr19:44787000-44790600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr19:44787200-44788400 ZNF genes & repeats Pancreas Pancrea
22 chr19:44787400-44790400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr19:44787400-44790800 Weak transcription Fetal Brain Male brain
24 chr19:44787400-44791000 Weak transcription Primary B cells from cord blood blood
25 chr19:44787400-44791200 Weak transcription Brain Inferior Temporal Lobe brain
26 chr19:44787400-44791400 Weak transcription NHEK skin
27 chr19:44787400-44791600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr19:44787600-44788800 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr19:44787600-44790800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr19:44787600-44791200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr19:44787600-44791200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr19:44787600-44791400 Weak transcription Brain Hippocampus Middle brain
33 chr19:44787600-44791400 Weak transcription HMEC breast
34 chr19:44787600-44792000 Weak transcription NHDF-Ad bronchial
35 chr19:44788000-44790400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr19:44788000-44799800 Weak transcription HepG2 liver
37 chr19:44788200-44790800 Enhancers Rectal Smooth Muscle rectum
38 chr19:44788200-44791000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr19:44788200-44791000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr19:44788200-44801600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015