Variant report

Variant rs2700227
Chromosome Location chr3:112824212-112824213
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112808800-112832400 Weak transcription Primary T cells from cord blood blood
2 chr3:112819400-112830400 Weak transcription Primary hematopoietic stem cells blood
3 chr3:112821200-112825800 Enhancers iPS-15b Cell Line embryonic stem cell
4 chr3:112821600-112825800 Enhancers HUES48 Cell Line embryonic stem cell
5 chr3:112821800-112824600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr3:112821800-112825200 Enhancers H1 Cell Line embryonic stem cell
7 chr3:112821800-112825600 Enhancers HUES6 Cell Line embryonic stem cell
8 chr3:112822000-112824600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr3:112822000-112826400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr3:112822200-112825800 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr3:112822200-112826200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr3:112822200-112829400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr3:112822400-112825000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr3:112822400-112825800 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr3:112823000-112825600 Enhancers Cortex derived primary cultured neurospheres brain
16 chr3:112823000-112825800 Enhancers Fetal Stomach stomach
17 chr3:112823200-112824400 Enhancers Fetal Muscle Leg muscle
18 chr3:112823200-112824400 Weak transcription A549 lung
19 chr3:112823200-112825000 Enhancers Ovary ovary
20 chr3:112823200-112826600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr3:112823400-112824400 Enhancers ES-WA7 Cell Line embryonic stem cell
22 chr3:112823400-112824400 Weak transcription HepG2 liver
23 chr3:112823400-112827600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr3:112823400-112827600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr3:112823600-112824400 Enhancers Stomach Smooth Muscle stomach
26 chr3:112823600-112824600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr3:112823600-112824600 Enhancers Colon Smooth Muscle Colon
28 chr3:112823800-112824400 Enhancers Adipose Nuclei Adipose
29 chr3:112823800-112824400 Enhancers Fetal Lung lung
30 chr3:112823800-112824600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
31 chr3:112823800-112824800 Enhancers HSMMtube muscle
32 chr3:112824000-112825000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr3:112824000-112825000 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
34 chr3:112824000-112825000 Enhancers NHDF-Ad bronchial
35 chr3:112824000-112825800 Enhancers HUES64 Cell Line embryonic stem cell
36 chr3:112824200-112824400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr3:112824200-112824600 Weak transcription H9 Cell Line embryonic stem cell
38 chr3:112824200-112825200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr3:112824200-112825800 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr3:112824200-112828000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr3:112824200-112828800 Weak transcription Fetal Muscle Trunk muscle
42 chr3:112824200-112829800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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